Pseudomonas sp. 21, UB43_RS07140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 21 contig3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGCAGTTCGCTCCAGTTCTCGATGGAGAGCAGGATCGATACCTTCGGGTGCGCGCTGCTGTAGCGCGCGAGCACCTGTGGCATCAACCGCGCGCCGGG GAAGGGGCCGGCGCCCAGGCGCAGTTCGCCGGTTTCCAGGTCGGCCAGTTGCAGCACCGCATTCTTCAGCGCGCGATCACCGGCCAGCAGGCGGCGGGCG TGTTCAAGCACCAGCCGGCCGTGGGCGGTGAGGGTGACGCCGCGCGGGTTGCGGTCGACCAACTGGCAATTCAACTGGCCTTCCAGCGCCTGGATGCTCC GCGACAGGGCGGGTTGACTAAGATTCACCGCATCCGCGGCGCGGGCGAAGTGACCGTGCTCGGCGAGGGCGACGAAGTGGCGTAGCTGGCGAAGATCGCT CATGCGCTTCCTGCATTGATTGTGAAGTTGGAATGCATTGGAATTATTAGCGCGACGGCCGGCATAGTGCGAGCACAACTACAAATACCGGAGCCCTCCG
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| DNA Sequence for Gene |
>UB43_RS07140
ATGTCCCGTCTTTCCGCAGCCGTGCTGCTTGCCAGCCTCTGCCCCGGCCTGCTGGTCGCCGCCGAACAGCCCAAGCCCCCGACTTCCTTTACCCAGGCCG CGCAGGAACAGGTACGCCAGTCGCTGCCGTTCAGTGACCGCGCCGACTTCGACCGGGTGGAGAAGGGACTGATCAAGCGTCCCGAGAACCTCGTGATCAA GAACGAGGACGGCACGGTCGCCTGGCAACTGGGCGGCTACGACTTCCTCAAGGCCGCCAGGGACGTCGCCAGCGTCAACCCGAGCCTGATGCGCCAGGCC CAGCTGAACCTCAGCTACGGCCTGTTCAAGGTGACCGACGGCATCTACCAGGTGCGCGGCTTCGACCTCGCCAACACCACCTTCATCGAAGGCAAGACCG GCTGGATCGTCATCGACACCCTGACCACCCCGGCGACCTCCAGGGCCGCCTACGCCCTGGTGAGCCAGGAGCTGGGACAGAAGCCGATCCGCGCGATCAT CTACAGCCATGCCCACATCGACCACTTCGGCGGCGTGAAGGGCCTGGTCAGCCAGGAGCAGGTGGACAAGGGCGAGGTGCAGGTCATCGCGCCCAAGGGC TTCATGGAGGCGGCGATCAAGGAGAACGTGCTGGCCGGCAACGCCATGCTGCGCCGCGCCACCTACCAGTACGGCACCCTGCTGCCCAAGGGGCCGAATG GCCAGGTCGACATGGCCATCGGCAAGGGCGTCGCCCACGGCCCGATGAGCATCATCGCGCCGACCAGGCTGATCGAGGGCAACCTGCAGGACCTGGAAAT CGACGGCGTACCCTTCACCTTCCAGAACACTCCGGGCACTGAATCGCCGGCGGAAATGAACGTCTGGCTGCCGCAGCAGAAGGCGCTGCTGATGGCCGAG AACGTCACCGCGACCCTGCACAACCTCTACACCCTGCGCGGCGCCGAGACGCGCGACCCGCTGGGCTGGAGCAAGTACATCAACGAGGCGCTGCACCGCT TCGGCGACCAGGCCGAGGTGATGTTCGCGGTGCACAACTGGCCGCGCTGGGGGCACGAGGACATCGTCCGCACCCTGGAGAAACAGCGTGACATGTACGG CTACCTGAACGACCAGACCCTGCACCTGGCCAACAACGGGGTGACCATCAACCAGATCCACGAGCGCCTGAAAGTGCCGCCGGAGCTGGCCAACGAATGG TTCAACCGCGGCTACCACGGCAGCGTCAGCCACAACGTGCGCGCGGTGGTGAACAAGTACCTGGGCTACTACGACAGCAACCCGGCGACGCTGAACCCGC TGGCGCCGGAGGATTCGGCGGTGAAGTACGTCGAGTTCATGGGCGGCGCCGATCACCTGCTGCAGATGGCCAAGGCTTCGTTCGACAAGGGCGAGTACCG CTGGGTGGTGGAGGTGGTCAACAAGCTGGTCTTCGCCGACCCGACCAACCAGGCCGCACGCAACCTGCAGGCCGACGCCCTGGAGCAGCTTGGCTACCAG GCCGAGAACGCCGGCTGGCGCAACAGCTACCTGACGGCCGCGCAGGAGCTGCGCAACGGTGTGCCGAGTGACCTGCCGTCGATGAAGTCGGGCAGCCCCG ATGCGCTGGCGGCGATGGATACCGGCCTGCTGTTCGACTACCTGGGCGTGCGCCTGAACGCGGAGAAGGCCGAGGGCGAGGACTTCGCCATCAACCTGGT GCTGCCGGACAGGAACGAACAGTACCTGCTGGAGCTGAAGAACTCGCACCTGAACAACATCAAGGGCGTGCAGAGCGAGAACGCCGGGCAGACCGTGACC ATCGACCGTGCCGACCTCAACCGCCTGATGCTCAAGGAAGTCTCGCCGGTGCGCCTGGTGTTCGAGGGCAAGCTCAAGAGCTCGGGCAACCCGCTGCTGC TGGCCAAGCTGTTCGGCATGCTGGAAGACTTCAACTTCTGGTTCGACATCGTCACCCCGCCGCAGAAGAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTTTCCCCTCCGACGCGGCCGGTTCCCCGCCAGGCCGCGTCTCCCCTGGATGGCACACTGCAATGATTGCATTGTGCCATTGTTTTTTTCGCGGCCAG TCTGCACCATGCCACCCCTGCGCCCGCAGCTGGTTGCCGGCGCTCGCAGTCGAGTAGTCGCGATCGTGCTCAACCGTTGTTCCAGGGTGTTGCGTCGTCG CTGGCCGGGGCCGTTGGCCCTGATGCTGGCGGCTTCGCTCGGCGTCCTGGCGGGGGCGCAGCAGGTCGAGTGGGACTTCAAGCGGATCAGCCAGCAATCC GCTCGCCTATACGGGCCGCTGGGCGACGGCCAGGTGCGCATCGACGCCTGGCAGAAGCTGCTCGCGCAACAGGTCACGGCGAGCGAGCGTGACCAGCTGC AGGCGGTCAATCGCTTCTTCAACGAGCAGCTGCGCTTCACCGATGACCTGAGCCTCTGGCACGAAGTGGACTACTGGGCCACGCCGGTCGAGGCCTTGCT
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| Amino Acid Sequence |
>hypothetical protein
MSRLSAAVLLASLCPGLLVAAEQPKPPTSFTQAAQEQVRQSLPFSDRADFDRVEKGLIKRPENLVIKNEDGTVAWQLGGYDFLKAARDVASVNPSLMRQA QLNLSYGLFKVTDGIYQVRGFDLANTTFIEGKTGWIVIDTLTTPATSRAAYALVSQELGQKPIRAIIYSHAHIDHFGGVKGLVSQEQVDKGEVQVIAPKG FMEAAIKENVLAGNAMLRRATYQYGTLLPKGPNGQVDMAIGKGVAHGPMSIIAPTRLIEGNLQDLEIDGVPFTFQNTPGTESPAEMNVWLPQQKALLMAE NVTATLHNLYTLRGAETRDPLGWSKYINEALHRFGDQAEVMFAVHNWPRWGHEDIVRTLEKQRDMYGYLNDQTLHLANNGVTINQIHERLKVPPELANEW FNRGYHGSVSHNVRAVVNKYLGYYDSNPATLNPLAPEDSAVKYVEFMGGADHLLQMAKASFDKGEYRWVVEVVNKLVFADPTNQAARNLQADALEQLGYQ AENAGWRNSYLTAAQELRNGVPSDLPSMKSGSPDALAAMDTGLLFDYLGVRLNAEKAEGEDFAINLVLPDRNEQYLLELKNSHLNNIKGVQSENAGQTVT IDRADLNRLMLKEVSPVRLVFEGKLKSSGNPLLLAKLFGMLEDFNFWFDIVTPPQKS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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