Pseudomonas sp. 21, UB43_RS06690

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCCCGGTGATTACGTCGACGTCATGCTCTTCGTCCAGGACCAGCAGAGCACCGAGCGCAGCCTCAGCGCCCAGGTGGTGCTGCCCGGCGTGCGGGTGCT GACCTACGGCGAGCAGATCGCCGTTTCCACCGACGGCCAGGCGCGCAACGCCGGCGACCCCAAGGACAAGACACCCAAACCGCCGCGCACTGCCGTGCTG GCGGTACCCGCCGAAGCCGCTTCGCGCCTGATGCTGGCCAGCCAGGCCGGGTCCCTGCGCCTGGCCGTGCGCAGCAAGGACGAGAACCTCTACGAGAAGG AGCAGCAGGGCCGCTATATCCAGGCCTCGCTCGGTTCCGCCGGCAGCCAGCCGATCACCCTCGAGCAACTCATCGGCAAGCCGCGTCAGGCCCCGGCGCC CGCCGTGCGCCAGGTCTCCGCCCCGCAGGTTGACGCCGGCGTGGTGGTCTACCGGGGCACCACCGTTACCCGTGAAGCACATTGAGCAAGGAGTGCATCG
DNA Sequence for Gene
>UB43_RS06690
ATGTCCAAGCGCTTCATCCTTCCCCTGGTTGCCCTGCTGGCTTGCGCCGTTCACTCCGCGGCCCAGGCCGTGCCGAGCGCCTGCGCAGGCTTTGCTGACC AGCAACTGAATCTCGATGTCGAGCAGGGCGCCCAGCGCGACCAGCAACTGCCGGTGCCGATCAAGCGGCTGGCCATCGGCGACCCGAACATTGCCGACGT GCAGGTGCTCGACAAGCGCGACTTCCTCGTCACCGGCAAGGCCGAAGGCCTGACCAGCCTGCTGATCTGGACCGCCTGCAGCGACCAGCCGATGCGCACG GTGGTGCGCGTCGGTGCGCGTGCGGTGGGCGACGTGGCGGGCGCAACCGGCGTTGGCGCCGGCAGCCTGCCCAACCAGGTGCAGACCGATATCCGCTTCG TCGAAGTCAGCCGCAGCAAGCTCAAGCAGGCTAGCACCTCGCTGGTGCGGCGCGGCTCCAACACCTTCGTGCTGGGCTCGCCGGGCAGCCTGGGCAGCAT GACGGTCGATCCCGTCGGCAACCTCGATGGCACCTTCGGCAACGCCAACGGCGGCTTCAACATCATCTGGGGCGGCGGCAGCAGCAAGTGGCTGGGCTTC ATCAATGCCCTGGAAGGCAGCGGCTTCGCCTACACCCTGGCGCGGCCCAGCCTGGTGGCTACCAGCGGGCAGACGGCGTCGTTCCTGGCCGGCGGCGAGT TCCCGATTCCCGTGCCCAATGGCGACAAGGACACCATCACCATCGAGTACAAGGAGTTCGGCGTGCGCCTGACCCTGACCCCGACGGTGATGAACGACAA GCGCATCGCCCTGAAGGTCGCCCCGGAAGTCAGTGAACTGGACTTCTCCAGCGGCATCCGCACCAACGACATCGCCGTGCCTGCGCTGACCGTGCGGCGC ACCGATACCAGCGTGATGCTCGCCGACGGCGAAAGCTTCGTGATCAGCGGGCTGATCAGCAGCAGCACCATCAGCAACATCGACAAGTTCCCCTTCCTCG GCAGCATCCCGGTGATCGGCGCGCTGTTCCGATCTTCGAACCTGGACAAGGACGACCGCGAGCTGCTGATGATCGTCACCCCGCACCTGGTCCAGCCGCT GGCGGCCAATGCCGCGCTGCCCAAGCTGCCCGGCGAAGGGCTGCGTGACTACGACCCGGGCTTCGGCGAGTTCTACTTCCTCGAGGACGGCCGCTTCGAC AAGCGCAAGGCCAGCAGCGGGATGTCGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGATACCTACGAAGCGCTGACCCGCCAGAGAGCGGGAGGCAAGGCAAAGCAAGGGAGCACGGGCATGAGTCAGACTTTCGTGGCGCTGGTCCAGCATCC CGGTGAGCAGGAGTGGCTGCAGAGCAGCCTGGCCGGCTGCGGGCAGGTGGTTCTGGCCAATAGCGGGACCCTGGAAGAACTGCTGTCGCTGCTGGACGTC ACCGGCGCGACGGTCCTGTTCACCAGCCTGAACAAGGCCAACCTGGTCTCCCAGGGCTCGCTGATCGAGGGGCTGGTCTCGGCGCGGCCGCTGCTCTCGG TCGTCGCCGTCGGCGATGGCCTGGACAACCAGCTGGTGCTGGCCGCCATGCGCGCTGGAGCACGGGACTTCGTCACCTACGGCGCCCGTGCCAGCGAGCT GAGCGGGCTGGTCCGCCGTCTCGGCGGGCGCCTGCCCACGGTGCCGGTAAGCGCCACCCAGCAGGGTGAACTGATCAGCCTGATCAGCGCCCGGCCCGAC
Amino Acid Sequence
>secretin
MSKRFILPLVALLACAVHSAAQAVPSACAGFADQQLNLDVEQGAQRDQQLPVPIKRLAIGDPNIADVQVLDKRDFLVTGKAEGLTSLLIWTACSDQPMRT VVRVGARAVGDVAGATGVGAGSLPNQVQTDIRFVEVSRSKLKQASTSLVRRGSNTFVLGSPGSLGSMTVDPVGNLDGTFGNANGGFNIIWGGGSSKWLGF INALEGSGFAYTLARPSLVATSGQTASFLAGGEFPIPVPNGDKDTITIEYKEFGVRLTLTPTVMNDKRIALKVAPEVSELDFSSGIRTNDIAVPALTVRR TDTSVMLADGESFVISGLISSSTISNIDKFPFLGSIPVIGALFRSSNLDKDDRELLMIVTPHLVQPLAANAALPKLPGEGLRDYDPGFGEFYFLEDGRFD KRKASSGMSH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site