Pseudomonas sp. 21, UB43_RS05830

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCAGCTCCCGCGCCATTACCCAGCTGATCCTGCACCTCGTGGAAGGCACCCCGATCCGCCTGGTGGACGGCGGCGAGCAGAAGCGCTGCTTCACCGACG TGGACGACGGCATCGAGGCGCTGGCGCGCATCATCGACAACGAAGGCAGCCGCTGCGACGGGCAGATCGTCAACATCGGCAACCCGGACAACGAAGCCAG CATCCGCCAGTTGGGCGAAGAGCTGCTGCGCCAGTTCGAGGCCCACCCGCTGCGCGACCAGTTCCCGCCCTTCGCCGGCTTCCGCGAAGTGGAAAGCCGC AGCTTCTATGGCGACGGCTACCAGGACGTGTCGCACCGCAAGCCGAGCATCGAGAATGCCCGTCGCCTGCTGGACTGGCAGCCGAGCGTGGAGCTCTCCG CCACCATCGGCAAGACCCTGGACTTCTTCCTCCGCGAAGCCCTGGCTGAACGCGTCGGCGGTGTACCCCACGCCTTCCCGCTGAAGAAAAGCATCGCCGG
DNA Sequence for Gene
>UB43_RS05830
ATGAGAGCGGGACTGCGCATCGACGTCGATACCTACCGTGGCACCCGTGATGGCGTGCCACGGTTGCTGGACATGCTCGAGGAAGCCGACGTCAAGGCGA CCTTCTTCTTCAGCGTCGGCCCCGACAACATGGGCCGGCACCTGTGGCGCCTGATCCGCCCACAGTTCCTGTGGAAGATGCTGCGTTCCAACGCCGCCGG GCTCTACGGCTGGGACATCCTCCTGGCCGGCACCGCCTGGCCGGGCAAGCCGATCGGCCGCGACCTGGGCCACCTGATGCGGCGTGCCCAGGACGCCGGC CACGAAGTCGGCCTGCACGCCTGGGACCACCATGGCTGGCAGGCCAACGCCGGCCGCTGGAGCACGCCGCAACTGGAGCAGCAGATCTGCCGTGGCGTGG ACACCCTCGCCGACATCCTCGGCAACCCGGTGGAATGCTCGGCCGTGGCCGGCTGGCGCGCCGACGAACGCACCGTGGAAGCCAAGGAGCGCTTCGGCTT TCGCTACAACAGCGATTGCCGCGGCCGCTCGCTGTTCCGCCCACGCCTGGCCGACGGCCGCGCCGGTACCCCGCAGATCCCGGTGGACATGCCCACCTTC GACGAGGTCGTCGGCCCGCAGGTGGCGCCGTCCGCCTTCAATGACTACATTCTTTCCCGCTTCGACATGGACGCCTTGAACGTGTACACCATCCACGCCG AGGTCGAGGGCATTCTCATGGCCCACGACTTCCGACGCTTGCTGGCCCAGGCACGGGCCGGCGGCATCCGCTTCGTTCCGCTTGGCCGGCTGCTGCCGGA CGACCCCACCACCCTGCCCGTCGCCAGCCTCGTGCGCGGCGAACTGGCCGGCCGCGAAGGCTGGCTGGGGGTGCAGCACGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCGCCTGGCCTACCCGACCCTGCTAGCCGCTTTCGTGCTGTGCATCCTGCTGCCGATGGCCTTCCACGGCCTGTGGATTCCCGACGAGTCACGCAACGC GCAGATCAGCCAGTCCATGCTGCAGAGTGGCGACTGGGTTTCCCCGCACCTGCTCGGCCTGCGCTATTTCGAGAAGCCCACCGGCGGCTACTGGCTGACC GCCGCCAGCCAGGCCGTGTTCGGCCAGAACCTGTTCGGCGTGCGCGCCGGTTCCGCGCTGGTGACCGCACTGAGCACCCTGCTGGTCATCCTGGTCGCCC GCCGGCTGTGGAACGACCCGCGCCGCACCTGGGCCGCGGGCCTGCTCTACCTGAGCTTCGGGCTGATCGCCGGACAAGCCGGCTACGCCAACCTCGACCC GCAGTTCACCTTCTGCGTGAACCTCAGCCTCGGCGCCCTGTGGTTCGCCTTCGACGCCAGCACCACGCGCGGACGCTTCGCCGCCTGGAGTCTGCTGGGC
Amino Acid Sequence
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MRAGLRIDVDTYRGTRDGVPRLLDMLEEADVKATFFFSVGPDNMGRHLWRLIRPQFLWKMLRSNAAGLYGWDILLAGTAWPGKPIGRDLGHLMRRAQDAG HEVGLHAWDHHGWQANAGRWSTPQLEQQICRGVDTLADILGNPVECSAVAGWRADERTVEAKERFGFRYNSDCRGRSLFRPRLADGRAGTPQIPVDMPTF DEVVGPQVAPSAFNDYILSRFDMDALNVYTIHAEVEGILMAHDFRRLLAQARAGGIRFVPLGRLLPDDPTTLPVASLVRGELAGREGWLGVQHA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site