Pseudomonas sp. 21, UB43_RS28540

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005509 calcium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10277
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13360 PQQ-like domain IPR002372 Pyrrolo-quinoline quinone repeat 469 536 6.5E-8
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 182 219 16.0
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 495 527 0.024
Pfam PF13360 PQQ-like domain IPR002372 Pyrrolo-quinoline quinone repeat 72 231 1.7E-15
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 444 486 1.4
Gene3D G3DSA:2.140.10.10 - - - 25 585 0.0
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 88 119 9.6E-5
SUPERFAMILY SSF50998 Quinoprotein alcohol dehydrogenase-like IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily 42 578 0.0
FunFam G3DSA:2.140.10.10:FF:000003 Methanol dehydrogenase, large subunit - - 25 585 0.0
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 137 168 1.9E-4
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 286 313 140.0
NCBIfam TIGR03075 JCVI: PQQ-dependent dehydrogenase, methanol/ethanol family IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family 25 555 0.0
CDD cd10277 PQQ_ADH_I IPR034119 PQQ-dependent type I alcohol dehydrogenase 32 582 0.0
PANTHER PTHR32303 QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) - - 16 535 1.4E-52

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.