Pseudomonas sp. 21, UB43_RS28350

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig19, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACCGCCGCCGCTGCCTGCACGAACTGCTGCTGGTGGAGATGGACGCTGCGCAAACGGTCGCCATTCACCTTGCCATGCCACGGGACCCGCGCCTGCTGC GGCTGTGCAACGCGGTGATCGCCGCACCGGCGGACGAAACCGGCATGGAGGACTGGGCGCAGCAACTGAACATGAGCAGCCGCACCCTCGCCCGCCTGTT CCAGCGCGAACTGGGGATGAACTTCGGCGACTGGCGCACCCGCGTGCGCATGGTCCTCAGCCTGCAGCGCCTGATCGCCGGCGCCTCGGTGCTGGAAGTG GCGCTGGAGCACGGTTACCAGAGTCCGAGCGCCTTCTCGCAGACCTTCAAGCGCATCCTCGGGCAGTCGCCCAGCCACTACCAGGCGGTCCGCCGCTGAG CAGCCTGTCATTTTCGCGAGGCTGGTTGTCGGCCGTGCGAGAGAGCCGCGCCGGCTGAGTCCCTAACCTGCGGGAGTCCGAAGCAAAGGGACTCCCCGAC
DNA Sequence for Gene
>UB43_RS28350
ATGCCCATACCCTCCCCCAACCCGCGACATTCGCTGCTCGCCCTGGCTTGTGCCGGCCTGCTGCTCGGCGGCTGTTCGGCGGTCAGCGAACATCAGGCGC CTGCTATCCACCCGCCCGCTGGCGGCGACTGGCAGGCGCTCGCCAGCGGTACCGCTGCGCAGGAGCCGCCCACCGATTGGTGGCGGCTGTATCAGGACCC GCAACTCGACCAGTTGGTCGTCCAGGCCCTGCAGCATAACCAGGACCTGCAAGCGTCCCTCGCCCACGTCGACGAGCTGCTGGCCCTGCTCGGCCAGGCG CGGGCACAACGCTGGCCCAGCACCACGGCGAGCTGGCAGACCTTCTACGGCCGCACCAGCGACGACCAGACCGAAGCCAAGGCCACCGGCAACCGCGCCG GCGCGCAGTGGAACCAGGTGCCGGGGTTCGCGCTGGACTACCAGCTCGACCTCTGGGGCCAGGTGCGCCAGTCGATCCAGGCCGCCCAGGCCAACGCGGA GGCCGCCCAGGCCGCCCACGACCAGTTGCGCGTCAACGTCGCGGCCGACACGGCCCGCGCTTTTGCCAATGCCTGCGCCTACGCCGCGCGGGCGGCCATT CAGCAGCACTCGGTCGCGACCGTGGAGCACAGCCTTGACCTCACGGTCCGCCAGCGCCGGGCCGGGCTGGCTACCGATCTGGAAGTGGATCGCGTGCGCA GCCTGCTGGAGGAGACCCGTGCACTGCTGCCGCGCCTGGAGGCCGAACACCAGGCCGCGCTGGAAGAACTCGGCGTGCTCACCGGCAGCGAACCGGAGCA ACTGCCGGCGGCCGTCAGCGACTGCCAGAGCGTGCCTCAACTGAGCCAGGCACTGCCGGTTGGCGATGGCTGGGCGCTGCTGCAACGCCGCCCGGACATC CGCGCCGCCGAACGCGCGCTGGCAGCCGCCGGGCATGAAGTGGGCGTGCGCCAGGCGGACTTCTACCCGAGCGTGTCCTTCGGCGCATCGATCAGTTCCT CCGCCGAGCGCCTGCATGACCTCGGCGACCACGAGGCGATTACCTATGCCGTCGGGCCACTGATCAGCTGGAGCTTTCCCAACCTGCTCGTCACCCATGC CCGCCTCGAAGGCGCCCAGGCCCACGAACGCCAGCAGCTTGCCCGCTTCCAACAGCAGGCGCTGGTGGCGCTCAAGGAAGTTCGTCAGAGCCTGGCCCGC TACAGCGGCGAGACCGGCCACCGCGAAGCCCTGGCCGGCGCGCTCGACAGCAGCCGCAACGCCTACCGCCTGGCGCAGGTGAACTACCAGGCCGGCGCGC TGGACTTCCTCGACGTACTCGACAGCGAACGCGCCATGGTCCGCCTCGAAGCGGACAAGACCGAGGCCGACCGGCAACTGGTCGAGCGCCAGATCGAACT CTTCCGCGCCCTTGGCGGCGGCTGGCAGGACTCGCCGGCCGGCGTACCTGCCAGGCGCATCCTCTCTTCTACGGAACCCGCACGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATTGCCGTCGATGACCCGCAAGCCAACGCCGCCGAACAGGCCGCACAGTTCAACCGCAAGCGCCGCCAACGCCGCCTGACGTGGCTGGGCGCTGGCCT CCTCGCCGCCGTCGCGCTGGGCTATGGCTTCTACTGGGCTGGCATCGGCCGCTACCTGGAGGAAACCGACGACGCCTATGTGCGCGCCGACTGGATCACC ATCAGCCCGAAAGTCTCCGGCTACGTCGCCGAGGTACTGGTGGAGGACAACCAGCACGTCACCGCCGGCACCCCATTGGTACGCATCCAGGCGCGCGACT ACCAGGCCCGCGTGCAACAGGCGCTGGCGCGACAGGCCGAGGCCCGCGCCGCCATCGCCGCGCAGCAGGCCGCACTGGTGACGCTGGATACACAGTTGAA GGAGCAGAAGGCGCTGATCGACCAGGCCGACGCCGATATCGACAGCGCTCGTGCCGAACGCCAGCGCGCGCAGCTGGACTTCCAGCGCTACCGCGACCTG
Amino Acid Sequence
>multidrug transporter
MPIPSPNPRHSLLALACAGLLLGGCSAVSEHQAPAIHPPAGGDWQALASGTAAQEPPTDWWRLYQDPQLDQLVVQALQHNQDLQASLAHVDELLALLGQA RAQRWPSTTASWQTFYGRTSDDQTEAKATGNRAGAQWNQVPGFALDYQLDLWGQVRQSIQAAQANAEAAQAAHDQLRVNVAADTARAFANACAYAARAAI QQHSVATVEHSLDLTVRQRRAGLATDLEVDRVRSLLEETRALLPRLEAEHQAALEELGVLTGSEPEQLPAAVSDCQSVPQLSQALPVGDGWALLQRRPDI RAAERALAAAGHEVGVRQADFYPSVSFGASISSSAERLHDLGDHEAITYAVGPLISWSFPNLLVTHARLEGAQAHERQQLARFQQQALVALKEVRQSLAR YSGETGHREALAGALDSSRNAYRLAQVNYQAGALDFLDVLDSERAMVRLEADKTEADRQLVERQIELFRALGGGWQDSPAGVPARRILSSTEPAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site