Pseudomonas sp. 21, UB43_RS27745

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TACCCCGCTTCACCCACATTCCATGCACATTTTATCCACAGCTTTTCCCCGTCGCCCCGCCTTGCAAACACCCCCATAGCGCATTATCTTGTATCCCCGT TGCGGTATACCCCTACATCTTGGGGTTGCCACCACGAACCGGACACAAGAAGAAAGTCGAAATCCCGAGCCTGTTCCACGGCTCCTCCGGTTCCACCACA ACGTATTCCAGACGTACTGAGGTGCCAGGCGGCCCTGCCCGCAAGGAGCGATTCATGTCGATGGAAATGCGGTACGGGTGTTGCAACGTAACGTTCAACA CCACTAGGTATTGTGGTCCCGGCCCGTAAAGCCGGCACCCGAGTTGGGCCAGGGAGGCGCTTCGGGTCATCCCCCCTGTTCCAGAAGAATTCCAGCTTGC GGCTGCAATCGCGGGCGACCGCTCTTTTTGCTCTTTATTTCGCAACGGCGCCCCGGCGTCAGCAACACACCAAATTACGAGAACGTGGAGACAACCACCC
DNA Sequence for Gene
>UB43_RS27745
ATGCAAATCGACACCACTCGCGAGAACCCGCAGGCCAACGCGCCGCAGGCCGCCGAATCCGCACAGGATCTGGCCGCCACTGCGCCCGGCCAGCTGCGCG TGATCAAGCGCAACGGCACCGTAGTTCCCTACACCGATGACAAGATCACCGTAGCCATCACCAAGGCGTTCCTCGCCGTGGAAGGCGGCACCGCCGCCGC CTCGTCGCGCATCCATGAGACCGTGCGCCGCCTGACCGAACAGGTCACCGCGACCTTCAAGCGCCGCATGCCCTCCGGTGGCACCATCCACATCGAAGAG ATCCAGGACCAGGTCGAACTGTCCCTGATGCGCGCCGGCGAGCAGAAAGTCGCCCGCGACTACGTGATCTACCGCGAAGCCCGCGCCAACGAGCGCAAGA CCGCAGGCGTGGCCAGCGACATCGCCCAGCCGCACCCGAGCATCCGCATCACCAAGGCCGACGGCAGCACCCAGCCGCTGGACATGGGCCGCCTGCAGAC CATCATCCGCGAAGCCTGCGAAGGCCTGGCCGAAGTCGATGGCAGCCTGATCGAACGCGAAACCCTGAAGAACCTGTACGACGGCGTCGCCGAGAAGGAC GTCAACACCGCCCTGGTGATGACCGCCCGTACCCTGGTCGAGCGCGAGCCGAACTACTCCTACGTCACCGCCCGCCTGCTGATGGACACCCTGCGCGCCG AAGCCCTCGGCTTCCTGGGCGTCGCCGAGAGCGCCACTCACCACGAGATGGCCGACCTCTACGCCAAGGCCCTGGCCGCCTACGTCGAGAAGGGCTCCGA GTTCGAGCTGATCGACAGCAAGCTCAAGGGCTACGACCTGGCCAAGCTGGGCGCCGCGATCAACCACGAGCGCGACCAGCAGTTCACCTACCTCGGCCTT CAGACCCTGTACGACCGCTACTTCATCCACAAGGACGGCATCCGTTTCGAACTGCCGCAGGTCTTCTTCATGCGCGTGGCCATGGGCCTGGCCATCGAAG AGAAGGACCGTGAAGCTCGCGCCATCGAGTTCTACAACCTGCTCTCCTCGTTCGACTACATGTCGTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCG TCCGCAGCTGTCCTCCTGCTACCTGACCACCGTGCCGGACGACTTGTCGGGCATCTACAACGCGATCCACGACAACGCCATGCTGTCGAAATTCGCCGGC GGCCTGGGCAACGACTGGACTCCGGTGCGCGCACTGGGCTCCTACATCAAGGGCACCAACGGCAAGTCCCAGGGCGTGGTTCCGTTCCTGAAAGTCGTGA ACGACACCGCCGTCGCCGTGAACCAGGGTGGCAAGCGCAAGGGCGCCGTCTGCGCCTACCTGGAAACCTGGCACCTGGACATCGAGGAATTCCTCGAGCT GCGCAAGAATACCGGTGACGACCGTCGCCGTACCCACGACATGAACACCGCGAACTGGATTCCGGACCTGTTCATGAAGCGCGTCTTCGACGACGGCAAG TGGACCCTGTTCTCCCCGTCCGAAGTACCGGACCTGCACGATCTGACCGGCAAGGCCTTCGAAGAGCGCTACGAGTATTACGAAGCCCTGACCGAGTACA ACAAGATCAAGGTGTTCAAGGTCGTCCAGGCCAAAGACCTGTGGCGCAAGATGCTCTCCATGCTCTTCGAGACCGGGCACCCGTGGCTGACCTTCAAGGA CCCGTGCAACCTGCGCAGCCCGCAGCAGCACGTGGGCGTGGTCCACAGCTCGAACCTGTGCACCGAGATCACCCTGAACACCAACAAGGACGAGATCGCG GTCTGCAACCTGGGCTCGATCAACCTGGTCAACCACATCGTCGACGGCAAGCTGGACACCGCCAAGCTCGAGAAGACCGTGAAGACCGCCGTGCGCATGC TCGATAACGTTATCGACATCAACTACTACTCGGTCCCGCAGGCTCGCAACTCGAACCTCAAGCACCGCCCGGTTGGCCTCGGCATCATGGGCTTCCAGGA CGCGCTGTACCTGCAGCACATCGCCTACGGCTCGGACGCTGCCATCGAGTTCGCCGACAAGTCCATGGAAGCGGTGAGCTACTTCGCCATCCAGGCTTCC TGTGACCTGGCCGACGAGCGTGGCGCCTACGAGACCTTCGACGGCTCCCTGTGGTCCAAGGGCATCCTGCCGCTGGACTCCCAGCAGATCCTCATCGAAG CCCGTGGCCAGAAGTACATCGACGTCGACCTCACCGAATCCCTCGACTGGGCTCCGGTCCGTGCCCGCGTACAGAAAGGCATCCGCAACTCGAACATCAT GGCCATCGCGCCGACCGCGACCATCGCCAACATTACCGGCGTATCGCAGTCCATCGAGCCGACCTACCAGAACCTGTACGTGAAATCGAACCTCTCCGGC GAGTTCACCGTGATCAACCCCTACCTGGTTCGCGACCTGAAAGCGCGCGGCCTGTGGGACCCGGTCATGGTCAACGACCTGAAGTACTACGACGGCTCCG TGCAGCAGATCGAGCGCATCCCGCAAGACCTGAAAGACCTGTACGCCACCGCCTTCGAAGTCGAGACCAAGTGGATCGTCGACGCCGCCAGCCGCCGCCA GAAGTGGATCGATCAGGCCCAGTCCCTGAACCTCTACATCGCCGGCGCCTCGGGCAAGAAGCTGGACGTGACCTACCGCATGGCGTGGTTCCGTGGCCTG AAAACCACCTACTACCTCCGTGCCCTGGCCGCCACCAGCACCGAGAAGTCCACCATCAACACCGGCAAGCTCAACGCCGTGTCCGCGGGTGGCAACGATG GCCTGCAAGCCGCCGCTGCCGAGCCGCAACCGGCTCCGGTTCCGCAAGCCTGCTCCATCGACAATCCGGACTGCGAAGCCTGCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGAGTAAGCGGTCCTCGGAACGGTCCGCGCGTCGTTGCCCGGCAGGTCGGCCCCCATCACGTACAGTCGTACGCTCAGGGGCTCCGACCTACCAGGCGC CTAGCGCGGCCTCGCCCCGAGGCACCGCCAGAACTCCGCAGCTTCACAGTCCCCTCTCCCTTCAGGGAGAGGGTCAGGGAGAGGGGCTCTTGATCCCTCC CCGCAAATTCGAGCTTTAGCGTGCACCCATCACGCAACCAGACACCAGGCCGCCACAGAGCGGCCCACCAGGAGAGGACCCCCATGCTGAGCTGGGACGA ATTCGACAAAGAAGACGCCACCGAAGCCAAGGCCGCCCCGGCCGTCGCCCAGGCCGCTGCGCAGAACGCTGACAAACTCGACGCCGACGCCGCAGGCTCC GTCGAAGAAGCACGCGCCGTATCCGCCAACGACTCCGACGCCGTAGCCCGTGCCAAGCAGGCCCTCGACGCCCTGGACATCCAGGAAGGCCTGGACGATC
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit alpha
MQIDTTRENPQANAPQAAESAQDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHETVRRLTEQVTATFKRRMPSGGTIHIEE IQDQVELSLMRAGEQKVARDYVIYREARANERKTAGVASDIAQPHPSIRITKADGSTQPLDMGRLQTIIREACEGLAEVDGSLIERETLKNLYDGVAEKD VNTALVMTARTLVEREPNYSYVTARLLMDTLRAEALGFLGVAESATHHEMADLYAKALAAYVEKGSEFELIDSKLKGYDLAKLGAAINHERDQQFTYLGL QTLYDRYFIHKDGIRFELPQVFFMRVAMGLAIEEKDREARAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYNAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGK WTLFSPSEVPDLHDLTGKAFEERYEYYEALTEYNKIKVFKVVQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA VCNLGSINLVNHIVDGKLDTAKLEKTVKTAVRMLDNVIDINYYSVPQARNSNLKHRPVGLGIMGFQDALYLQHIAYGSDAAIEFADKSMEAVSYFAIQAS CDLADERGAYETFDGSLWSKGILPLDSQQILIEARGQKYIDVDLTESLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSG EFTVINPYLVRDLKARGLWDPVMVNDLKYYDGSVQQIERIPQDLKDLYATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWFRGL KTTYYLRALAATSTEKSTINTGKLNAVSAGGNDGLQAAAAEPQPAPVPQACSIDNPDCEACQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site