Pseudomonas sp. 21, UB43_RS27600

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCCCTCTCCCCAACCCTCTCCCTGAAGGGAGAGGGGGCAGTTCGGCGCCGCCAGTGACTCCGGTGTTCCGCCTTCTGCCGCTCAAGCCCCCTCTCCCGC TTGCGGGAGAGGGCTGGGGAGAGGGCAACCGAGTTCAGGAGCCACGCCAACGCGCGTGCCTCCGCACCGAGTCACTCCCGGACGGACGGGGCCGGGAATA CGGGGCCGCGTCCCCGTCCGTCCGGGTTTGACCTTGCTACTGAGTGCTTCAGCAGCAGAAACATGAACACCGAATGCTTGTCGGTCCATGGCCCCCACGC AGCAACTCCCAATGCTGGCCATGGAACTTTGAGGCTGTTGGCGGCGATCCCGCCGGCAGCCTCTTTTCTTTTTCCAACCCCGTGGCGCGGCCCCGTATGG CGGCGTCACAGAATGCTCACGCACTGCTCGTCGATGGGGCCACGATGCCCCACACCTACCGAAGCGCTGCGGAGCCCCATTTAACCTGCCCTGTACCCCC
DNA Sequence for Gene
>UB43_RS27600
ATGCACCTGAATCCCCAATCCTGGAAACATCAGCTCCGCACCCGGCTGATCGGCTTCGGCCAGATCTACCTGCAGGCTGACGCACGCTTCGGCCTGATCC TGCTGCTGACCATCGCCTGGTCCGCGCCGCACCTGCTGCCCGGCGCCTTGCTGGGCGCCCTGCTCGGCCCGCTCACCGCGCGCTTCGTGCGCGAGCCGCA AGCGGACATCGACGCCGGCCTGCACGACTACAACCCGATCCTCATCGGCCTGCTGCTGCCCTTCCTGTTCCAGTGGTCGCTGGGGCTGGTGATGCTGACC ATCGCCGCCATCCTCACCAGCGTCGCCGTGCAGGCCGTGCTGCTGCGGCAGTCGCGCCGGCGCTTCGGCGTGCCGGCCTATACCTCGGCCTTCGTGCTGC TGGGCTGGGTGTCCAGCGCGCTGGGCAAGGCCATCGGCCTGGCGCCGGCGGCCGGTGCCGCCTGCCTGTCGTGTGGTGCGGTGAGCCCACTGCTGGATTC CTCCGCACTGGGCTTCGGCGAAGTGATCTTCCTCGGCGAACCACTGGCCGGCCTGACCATCGCCCTCGGCCTGTTGCTGGCGGATCGCCGCGCCGCCTTC TGGGCACTGGCCGGCGCCGTCGGCGCACTGGCCGTGGCGCCGCTGTTCGAGCTGCCGCCCGCCTCAGCGCAGGCCGGCCTGCTCGGCCTGAACGGCGCGC TGGCCGGTATCGCCCTGTCGCTGCGCTTTCGCAGCCCCCTGGCACCACTGTGCGGCATCCTCCTGGCGGTGCTGCTGCAACCGGCTTTCGCCCTCGTCGG CCTGCCCGCGTTCACTGCACCCTTCATTCTCGCCTGCTGGCTGGTGATCCTCGGCCAGCGCGCGCTGGAAGCGCTGCTGCACGATCCGCAAAGGGAAAAC AGCGGCCCGCGTGTATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGGGGCCCTCTTCCGGCGACGGATCGCACCGATGAACTTCGTGAAATACCAGGCCCTGGGCAACGACTACCTCGTCTATGCCGGTGACGCACCGTTCG CCCTGACCTCCGAGCAAATCGGCCGCGTCTGCGACCGCCACCACGGCATCGGTTCCGACGGCATCCTGGTGGCGAACCACACGGATGCCGCCTTCGGTCT GCGCATCCTCAACCCCGACGGCTCCGAGGCGGAGAAGAGCGGCAACGGCCTGCGCATCTTCTCCCGCTACCTGTGGGATTGCGGGCTGGTCGCCGGGCAG CCGTTCGACATCGTCACCGCCGGCGGTACCGTCACCAGCCAGGTGTTCGACGAGGGCCGCAGCGTGGAGGTGTCCATGGGCCGCGCCGAGTTCGCCTGCG CGAAGATTCCGCTGCTGATCGACGCACCCGAGGCGCTGAACCATGCGCTGGAAGTCGACGGCGAATCGCTGAAGATCAACGCCGTTTCCATGGGCAATCC
Amino Acid Sequence
>transporter
MHLNPQSWKHQLRTRLIGFGQIYLQADARFGLILLLTIAWSAPHLLPGALLGALLGPLTARFVREPQADIDAGLHDYNPILIGLLLPFLFQWSLGLVMLT IAAILTSVAVQAVLLRQSRRRFGVPAYTSAFVLLGWVSSALGKAIGLAPAAGAACLSCGAVSPLLDSSALGFGEVIFLGEPLAGLTIALGLLLADRRAAF WALAGAVGALAVAPLFELPPASAQAGLLGLNGALAGIALSLRFRSPLAPLCGILLAVLLQPAFALVGLPAFTAPFILACWLVILGQRALEALLHDPQREN SGPRV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site