Pseudomonas sp. 21, UB43_RS26875

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TAGCCGGTGGCGGTGAAGAAGGCCGGGATGCCGGCGCCGCCGGCGCGGAGTTTTTCCGCCAGGGTGCCTTGCGGGGTCAGTTCGACCTCCAGCTCACCGG ACAGCAGCTGCTGCTCGAACAGCGCGTTCTCGCCAACGTAGGACGCGATCATCTTGCGGATCTGCCGGTCCTCCAGCAGCACGCCGAGGCCGAAGCCGTC GATGCCGCAGTTGTTGGAAACCACGGTCAGGCCCTTCACGCCCAGCTTGCGAATCTGCGCGATGAGGTTTTCCGGGATGCCGCAGATACCGAAGCCGCCC GCCAGTACCGTCATGTCGTCGGTGAGCCCGGCGAGGGCTTCCTCGTAACTGCCTACACGCTTGTCGAGTCCTGCCATGTTGCTGCTGCCTCTTGTATTTG GAATGTCCGACTCAGTGGTCAGAGAGCGAATGCAGCTTCACCGGCACAGACTGATTTGTTAAGTTTGTTTTTCCAATCGATTGATTTGGCATTTTTATAA
DNA Sequence for Gene
>UB43_RS26875
ATGACCGTGAAGCAACTGCGCGCCTTCCTCGCCGTCGCCCAGAGCCTGAGCTTCGCCCAGGCCTGCGAGCGCCTGCACCTGTCGCAACCGGCGCTGAGCC TGGCGATCAAGAGCCTGGAAGAATCCCTGGGCGGCCAGCTGCTGGTGCGCACCACCCGCAGCGTGGCGCTGACTCCCGAGGGCGAGACCCTGCTGCCGCT GGCCCGCAGCCTGCTGGCGGACTGGGACAACGCGGAGGAAGTGATGCATCAGCACTTCACCCTGCAACTGGGCAAGGTCTCCATCGCCGCCATGCCCTCC TTCGCCGGCAACCTGCTGCCCGCCGTATTGCGCGCATTCCGCGACCGTCACCCGCGGGTGAACGTGGCGGTGCACGACGTGATCAACGAGCAGGTGCTGG AGATGGTCCGCAACCGCCGCGTGGAACTGGGCATCGCCCTGGAGCCGGACAGCCTGGACGGGCTGTCCTTCACGCCCTTCTACACCGACCGCTTCGTCGC CGTGCTGCCGGCCGATTCGCCGCTGGCGGGTGAGTCGACCATCACCTGGGACCAGCTTCTGGAAGATCACTTCATCACCCTTCAGCGCCCGTCCGCCGTG CGTTTGCTGCTGGAAGACCAGCTGCAGGGGCGACTGCCGGTGGCGTTCGAAAGCCATCAGTTGGTGACCGTGGGGCGGATGGTGGCCGAAGGGCTGGGCG TCAGCGCCGTGCCGCGCCTGTGCCGGCAGCAGATGGAGGAACTGGGGGCGCGCTGCGTGGCGCTCGACCAACCACGCATCGAGCGCCGCGTCGGGCTGTT CTGCCTGGCGGAGCACAAGCTCTCCAGCGCCGCGCAGGCGCTGAGCGATGTGCTGGTGAAGGGGACGGATTGGGCGGGCATGGAGCAACCGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCGGTCATGCCGGCTTGCCGCGCACACCTGTAGGAGCGGGCCATGCCCGCGATCGCGCGCACGGCGCGCTCCTACACTTCGACTCCCGGGTTGAACGAT TTCAAGCCTCTCCCCCCATCTGCAAACTGATCTCCCGAGCTACCACCCGCAAGGTCCGCGCCGCGCAGGCGCAGAGTGATGTGCTGGTGAACGGGACGGA TTGGGCGGGCANNNNNNNNNNNNNNNNCATGCCCGCGATCGCGCGCAAGGCGCGCTCCTACACTTCGACTCCCGGGTTGAACGATTTCAAACCTCTCCCC CCATTCGCAAACTGATCTCCCGAGCTACCACCCGCAAGGTCCGCGCCGCCTCGCCGTGAACTTCGGCGGCAAAGCTCGCCTGCGAGCCGACCACGGTAAT CACCCCAGCCAGTTCGCGGCCCGTCTTGAACAGCGGCACCGACAGCGCATTCACCCCCGGCATCAGCAGGCCGTGGACGGCATGCAGGCCTTCGCTGCGA
Amino Acid Sequence
>LysR family transcriptional regulator
MTVKQLRAFLAVAQSLSFAQACERLHLSQPALSLAIKSLEESLGGQLLVRTTRSVALTPEGETLLPLARSLLADWDNAEEVMHQHFTLQLGKVSIAAMPS FAGNLLPAVLRAFRDRHPRVNVAVHDVINEQVLEMVRNRRVELGIALEPDSLDGLSFTPFYTDRFVAVLPADSPLAGESTITWDQLLEDHFITLQRPSAV RLLLEDQLQGRLPVAFESHQLVTVGRMVAEGLGVSAVPRLCRQQMEELGARCVALDQPRIERRVGLFCLAEHKLSSAAQALSDVLVKGTDWAGMEQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site