Pseudomonas sp. 21, UB43_RS26500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGTACTTCGGCGTGCCCGCCCTGCTCCCGGAGGAGCTGGTGTTCTGGCTCAACTCGCCCCATGAGCTGGGCTGGCTGGCGTGGCCGTCCTTCGAGTTC CTTGCCGCCGCCTGGGGGCTGACGCTCTACACCACGGCGTTCATCGCCGAGGAATTCCGCGCCGGTATTGCCTCGGTCAGTGCGCCACAACGTGAAGCCG GCATGGCCTTGGGCCTTCGCCCGCTGCAGGTGTGGCGCTGGGTGATCCTGCCGCAGGCGCTGCGCACTGCGCTGCCTCCGCTGATGGGGCAATACATGAA TGCGCTGAAGAATTCCTCGCTGGCCATGGCCATCGGCCTCGCGGAGCTGTCCTACGCCTCACGCCAGGTGGAGACGCAGACCTTCAAGACCTTCCAGGCG TTCGGCATCGCCACCCTGCTGTACATCGGCGCCATCGCGCTGATCGAGGCGCTGGGCCAGGCGATCCAGCAGACCCGCCGCTATCGCCAGGGGGCCTGAC
DNA Sequence for Gene
>UB43_RS26500
ATGGATGTCTCGGTGATCTCGGACAACCTGTCCTATTTCCTCATCGGCGCCTACCCGGACGGCCCGCTGGGCGGCGCGGCGCTCACGGTGATCCTCGCGC TGGCCTCCGGCCTTGCCTCGGCGGTGATCGGCCTGGCACTGGGCATCGCGTTGTCGGTACTGGGCGGGAAGCCGCGCCTGCTGCTGGTGGCGTTCCTCGG TTTCTTCCGCGCCATCCCGGTGCTGATGCTGATCTTCTGGGTCTACTTCCTGCTGCCCATCGTCCTGCACATCGACGTGCCGGCACTGGGCACGGTGGTC TGCGCGCTGTCGCTGATCGGCGGGGCCTATCTGGCGCACTCGGTGCACGCGGGTATCGAAAGCCTGCCCAAGGGCCAGTGGGACGCCGCCCGCGCGCTGG GCCTGCGCCCATGGCAGGTACTCACCCTGGTGATCCTGCCGCAGGCGCTGCCGATCATGCTGCCATCGTTCCTCAACCAGTGGGTCTCGCTGATCAAGGA CACCTCGCTGGCCTACGTGATCGGCGTGGGCGAGCTGTCCTTCGTCGCCACCCAGGTGAGCAACCGGGTGATGGTGCACCCCACGGAAGTCTTCCTGTTC GTCGCCCTGCTCTACTTCCTGCTGTGCTCGGCGCTGGACCTGGCGGCAGCGTTGCTGGCGAGGTTGCGGCCGGCTTATCGCAAGCCCGTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGTCAGTATTCATCGTGCCGGCGCCACCACATGCCCTGCTCGTTGCGCCCCCGTGGCGCGCGGTCGAGCCACTGGAACAGGCCCCAGAGCGCATCCAGG CCGCGGGCGTAGGTGGAGTAGCAGTGATAGATGCGCTCGCCTTCGCGAACGAAGCTGCTCATGCCGGGCAGATCACGGGTAAAAGTCGCCACATCGGTGC CACAGCACGCGGCGGTTTCCACGACGGGGGCCGGTGCCGGGCCCTTGGCCGGGCCTTCGCGGCGGAAGTTGTAGTCGACTTCCCCGCCGCGCTGCTGCGC CTCGGTGAAGGACACATTGAAGTCGTAGTTGAAGCCGTTGCCGTGGGATGACGCCCAGGGGAAGCGCCAGCCCATGCGTCGGCGGTACGCCAGCAGCTTC TCCAGCGGCGCGCGGGAGACCGCCAGCAAGCTCACGTCGTGGTTCGCCAGATGAGTGGCATAGCCATCGAAACCATCGGCGATGTTCGAGCAGGACGGGC
Amino Acid Sequence
>ABC transporter permease
MDVSVISDNLSYFLIGAYPDGPLGGAALTVILALASGLASAVIGLALGIALSVLGGKPRLLLVAFLGFFRAIPVLMLIFWVYFLLPIVLHIDVPALGTVV CALSLIGGAYLAHSVHAGIESLPKGQWDAARALGLRPWQVLTLVILPQALPIMLPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEVFLF VALLYFLLCSALDLAAALLARLRPAYRKPV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site