Pseudomonas sp. 21, UB43_RS23465

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCACGTCGTGGTTGGCTTCACGCGCGCTTTCGCGCAGATCAGGCAGTACCTCCGCCGGATCGTTGGCGGCTACCGGTTCTTGTACGACGGCCAGTTCGG CCGCCATGGGATGTTCTTCCCGCAAAGCCCGCAGGGCAGGTTGACTCACGACACACCTCAGGTAGATGACAGCAGAGGGCCTGGAATGGCGGCAAGGACC CGCGCGGCCAGGCAGGGAGCAGGTTGGTAGTCGTTATTGGGCTTGTGTGGAAAGGATAAGGAGCGGGCTTTATTATTTCCAATATATTAATCGACACGTT TGATTCGTTTTACGAATCAAACGCCTGTGACGTCAGGTCAACGGCTGGTTCGCGAGCAAGCTCGCTCCTACAAGGCTCGCACCGTCGTTAACTTGTAGGA GCGAGCTTGCTCGCGAACCGCACGGCACGGGGCTCACCCCATCGCGGACGAAGTCCGCTCCCACCCAACCCGGAACACCGGCGCTCCAGCAGGGGGAAAC
DNA Sequence for Gene
>UB43_RS23465
ATGGAACTGCGACACCTGCGTTATTTCATCGCCGTGGCGGAGGAGCTGCACTTCGGCCGCGCCGCCGAGCAACTGGGGATTTCCCAGCCGCCGCTGAGCC AGCAGATCCAGGCGCTGGAGGAGGAGATCGGCGCGCGCCTGCTGGAGCGCACCAACCGCCGCGTGGCGCTCACCGAGGCTGGCAAGCTGTTTCTGGACGA GGCCCGGCAGGTCTTGCAGCAGGTGGATCGGGCCGTCTTGCTGGCGCGGCGTGCGCACCAGGGCGAGATCGGCGAGCTGAAGGTCGGTTTCACTGCCTCG GCGCCGTTCACCTCCAGCATTCCGCGCGCCATCCTCGCGTTCCGCCAGGCCTACCCGGACGTGCACCTGGACCTGCAGGAACTGAGCAGCGGCCAGGCCG TGCAGGCGCTGCTGGAAGAGCGCGTGCAGGTCGGCCTGATCCGTCCGATCCCGCTGCCGGAAACCCTGGAAGCCGTGGAGCTGTTCAGCGAGCCGCTGGT AGCCGTGCTGCGTGCCGACCACCCGCTGGCGCAGGCCAGCCAGGAGGGGCTGGAGTTCGCCGCGCTGGCGGACGAGCCGTTCGTGTTCTTCCCGCGCAGC TACGGCACGGGGCTCTACAGCCAGTTGATGGCGCTGTCGCGGCAGGCCGGCTTCAGTCCGCGCATCGCCCAGGAAGCGGGCGAGGCGATGACCATCATCG GCCTGGTGGCAGCGGGGCTTGGCGTGTCGATGCTGCCAGCGTCGTTCCGCCGGACGCGGGTGGACGGCGTGGTCTATCGCACCCTGAGCGATCCGGGCGC GACCAGCTCGGTGTGGCTGGTGCGGCGGCGCAACGAGACGTCACGCCTGGCGCAGTCGTTCTTCGACCTGGTGACCCAGGAGGTCCAGGCTGGCAGGGCC GGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGTGCCAGGTCAGTCGCAGGCTCAGGGCGCGGTGCTCTGCAGGATCTGCTGGTAGCGTCGCTGGTACTCGGAGTAGTCGAGGTTCTCCAGTTGCAGCGC CTGGATCTGCTCGTCCCGCGACAGGCCCGCCGTCTCGTTGGCAGCCGGCTGCGCCAAGCTGCGCACCGGAGCGGCGGAAGCTGCCGCGACAACACGGGTG CCGGCCAGCAGTTCGTCGATCACCGGGTCCATCTTCGCCTTGGTGCCCTGCCACTTCATCATCGACAGGCCGCCCTTGGCCCGCAGGTGGTACTCGGCGT GGCCGACCAGTTCCCGCGAAGGGCCGCGCACGGTGATCTCGGCGGTCGACAGGTACGGTGCCATGTCCCAGGAGCGACGGGCGTCGTAGGTCACCTGGTA GCGGCAGTCCGCCGGTGGCTGGCCGTCATAGACCTGCGCGGTGATGCCGTGACGGGCGAAGCCGCTCTGCAGCACCGGAACGAAGTCCGTGACCATCACC
Amino Acid Sequence
>LysR family transcriptional regulator
MELRHLRYFIAVAEELHFGRAAEQLGISQPPLSQQIQALEEEIGARLLERTNRRVALTEAGKLFLDEARQVLQQVDRAVLLARRAHQGEIGELKVGFTAS APFTSSIPRAILAFRQAYPDVHLDLQELSSGQAVQALLEERVQVGLIRPIPLPETLEAVELFSEPLVAVLRADHPLAQASQEGLEFAALADEPFVFFPRS YGTGLYSQLMALSRQAGFSPRIAQEAGEAMTIIGLVAAGLGVSMLPASFRRTRVDGVVYRTLSDPGATSSVWLVRRRNETSRLAQSFFDLVTQEVQAGRA G
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site