Strain | Pseudomonas sp. 21 contig10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTTCATTGAGCGATGTCGGTGGCGGCCTGCTGCTGGTTTCGCAGTTCACCCTGGCCGCAGACACCCGCAAGGGCCTGCGACCGAGCTTTTCCAGCGCGGC GCCTCCTGCAAGGGGCGCCGCGTTGTTCGATCTACTCGTGGAACAGGCGCGAGAGCGTCATCCGCTGGTCGCCACTGGCCGTTTTGGCGCCAACATGCAG GTCCACCTGGTCAATGACGGTCCGGTGACCTTTCTACTGGAGGCTTGAACGCGCGGCAGCTTGTCATATCGCCGTGGGATGATGGTTAGGGCTTATGCAC TTAGAACAATGCGCCTCCGGGAGCCCGAAGTACCCGTGGAAAGAATCGGGGAATCATTCAGGCTCACTGGGGTCGGAATTCAATCGCCAGCAGATTGGCA TCGCCTTTGCTGGCTTTAATCGTTTTGTGTTCACGGACGAGGGGGACTCGTGATTTTCCGTTCCGTTCAACAACCGCTTTCGCGCCAAATCCTTCGCGGA
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DNA Sequence for Gene |
>UB43_RS23205
|mdoG
CTGGTCGGCTCCGCCCTGTTGGCGTTGAGCGCTACCCATGCCTGGGCCTTCAATCTCGACGACGTTGGCGAAAAGGCCAAGGCGCTGGCTGCAGAGAAGT ACAGCGCACCGACGAGCAACCTGCCATCGGAATTCAGCGAAATGAAGTTCGCCGATTACCAGCAGATTCGCTTCCGTAACGAGAAGGCCTACTGGGCCGA CGAGAAGACCCCCTTCAAGATCAGCTTCTATCACCAGGGCATGCACTTCGACACCCCGGTGAAGATCAACGAAGTCACGGCAACCGACGTCAAGGAGATC AAGTACGATCCCTCCCGTTTCGATTTCGGTTCGCTGAAATTCGACGCCAATGCCACCAAGGATCTGGGCTACGCCGGCTTCCGCCTGCTGTACCCGATCA ACTCGCCGGACAAGCAGGACGAGATCGCCACCTTCCTGGGGGCGAGCTACTTCCGCATCATCGGCAAGGACCAGTGGTGGGGCCTCTCCGCCCGTGGCCT GGCGCTGGATACCGCGCTGCCGTCGGGTGAAGAGTTCCCGCGCTTCCGCGAGTTCTGGATCGAGAAGCCCAAGCCCAAGGACAAGCACCTGGTGATCTTC GCGCTGCTGGACTCGCCCCGCGCGACCGGTGCGTACCGCTTCACCATCCGTCCGGGCAACGACACCGTGGTCGACGTGAAGGCACGCGTGTTCCTGCGCG ACAAGGTGAGCAAGCTGGGCCTGGCGCCGCTGACCAGCATGTTCCTGTTCGGCTCCAACCAGCCGTCGGAAGAGCACAACTTCCGTCCGGAGCTGCATGA CTCCACCGGCCTGCAGATCCATGCCGGCAACGACGAGTGGATCTGGCGCCCGCTGAACAACCCGAAACACCTGTCCGTCAGCGCCTACAGCGTCGAGAAC CCGAAAGGCTTCGGCCTGCTGCAGCGTGGCCGCGAGTTCTCCCGCTACGAGGACCTGGACGACCGCTACGACCTGCGTCCGTCCGCCTGGATCGAGCCGC AGGGCGACTGGGGCAAGGGTACCGTCGAGCTGGTGGAAATCCCGACCCCGGATGAGACCAACGACAATATCGTCGCCTTCTGGAACCCCGAGAAGCGCCC GGAAGCCGGCGAGCCGCTGGACTTCGCCTACCGCATGCGCTGGACCAAGGACGAGGAAGCCCTGCACGACGCGAAGAACGCCTGGGTCATGCAGACCCTG CGCTCGGTCGGCGACGTGAAGCAGAAGAACCTGATCCGTCAGCCTGATGGCAGCGTCGCGCTGGTCGTCGATTTCGTCGGCCCGACCCTGAAGGCGCTGG CCGGTGATGCCCCGGTTAGCACCCAGGTGAGCACCGACGACAATGCCGAGGTGAAGGAAAACGCACTGCGCTACAACGCAGTGACCAAGGGCTGGCGTCT GACCCTGCGGATCAAGGTCAAGGATCCGAAGAAGCCGACGGAAATGCGTGCTGCGCTGGTAAACGGCGGCCAGACCATTTCCGAAACCTGGAGCTACCAG CTGCCTGCCGATGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTCCACCGCTACCACCGCGCCGGTGGCCGACTACCTCGCGCACCTGCCCCTTTCGGCGCAGGAGCGTGAGCGGCTGGCCAGGGCCGGTTCCTTCAGCGAG CTGCACGAGCAGCTCGCTGGCGATGTCGAGGGTGAGGATGCTGCGCTGGCTTCGGTCGGTGCGCGTCTGCGCCACGGCTACGGCCAGGACCTCGACGATG CGCAGATGCTGGGCATGGACGACAACGGCCGCACCTACCTCAAGGCCGCGCCGCCGATCCAGCGCACCAAGGTGATTCCCGAACCCTGGCGCACCAACCC GATCATGCGCGGCTGGCGCCGCCTGACCGGACGCAGCAACCCCTCCAAGCCCTCCCGCGACCTGCCCAAGGCGCGCTGGCAGCGGGTCGGCTCGCTGCGC CGGTTCATCCTGGTCCTGCTCATGCTCGGCCAGACCAGCGTCGCCACCTACTACATGAAAGGCATCCTGCCCTATCAGGGCTGGGCCTTCGTCGACCTCG
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Amino Acid Sequence |
>glucan biosynthesis protein G
MVGSALLALSATHAWAFNLDDVGEKAKALAAEKYSAPTSNLPSEFSEMKFADYQQIRFRNEKAYWADEKTPFKISFYHQGMHFDTPVKINEVTATDVKEI KYDPSRFDFGSLKFDANATKDLGYAGFRLLYPINSPDKQDEIATFLGASYFRIIGKDQWWGLSARGLALDTALPSGEEFPRFREFWIEKPKPKDKHLVIF ALLDSPRATGAYRFTIRPGNDTVVDVKARVFLRDKVSKLGLAPLTSMFLFGSNQPSEEHNFRPELHDSTGLQIHAGNDEWIWRPLNNPKHLSVSAYSVEN PKGFGLLQRGREFSRYEDLDDRYDLRPSAWIEPQGDWGKGTVELVEIPTPDETNDNIVAFWNPEKRPEAGEPLDFAYRMRWTKDEEALHDAKNAWVMQTL RSVGDVKQKNLIRQPDGSVALVVDFVGPTLKALAGDAPVSTQVSTDDNAEVKENALRYNAVTKGWRLTLRIKVKDPKKPTEMRAALVNGGQTISETWSYQ LPADE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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