Pseudomonas sp. 21, UB43_RS23180

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGCGCAACTGATTGCCGCACAGATCGCCGGGCGTCAGCCGGATATCGACACGACCGGCCTGACGCCCGCGCGACTGGCCGGCTGATTCAATCGGATTTG GAGACTCACCATGCAACTCACACGCATCGCCACCAATGACCGCCTTTCCGGCGCTATGGTCTTCGGCTCGCTGGTGTTCCTCTCCGGGCAGGTGCCCGGG CAGGCCGCCGACATCCAGGGCCAGACCCGCGAAGTGCTGGCGAAGATCGACGCGCTGCTGGCCGAAGCCGGCACCGGGAAGGCGAACATCCTTAGCGCGA CCATTTACCTCAAGGACATCGCGGCCGACTTCGAGGCCATGAATGGCGTCTGGTCCGCCTGGCTGCCGGAAGGCTGCGCACCGACGCGCACCACGGTGCA GGCGCTGCTGGCGCGCCCGCAGGTGCTGGTGGAAATCACGGTGATTGCCGCGCGGCCCTGAACCTCAACCCGACTCACAACAACAAGAAGGATCGCACCC
DNA Sequence for Gene
>UB43_RS23180
ATGAAACGACTTGCACTGGGAATGCTGGCGGCGTCCAGCCTGGTCTGCGCGCTGGCGCAGGCCGACGAGGCTCTGGACGGCACGCTGAAGAAAGTCGCCG AGCGCGGCACGATAACCCTGGGTTATCGCGACGCCTCGGTGCCGTTCTCCTACCTGGGCGACAACAGCGGGCAGCCCATGGGCTACTCGGTGGACCTGGC CGGCAAGGTGGTCGAGCGCATCCGGCAGAAGCTCGCCAAGCCTGACCTGGCGGTGAAGTACAACCTGGTGACCTCGCAGACGCGCATTCCGCTGGTGCAG AACGGCACGGTCGACCTGGAGTGCGGCTCCACCGGCGTCACCGCCGAGCGCCTGAAGCAGGTCGCCTTCTCCTACGGCTTCATCTACGTGAAGGGGCAAC TGCTGACCGCCAAGGACAGCGGCATCCAGGGTTTCGACGACCTCAAGGGCAAGAACGTGGTGACCACTGCCGGCACCACCAACGAGCGCTACCTGAAGGC CTACAACGCCGAGCACAAGCTGGGCATGAACGTGGTCAGCGCCAAGGACCACGGCGAGGCCTTCCTCATGCTGCAGTCCGGCCGCGCGGTGGCCTTCTAC ATGGATGACGCGCTGCTTTACGGCGAGAAAGCCAAGGCCCGCGATCCGCACCAGTGGGTGGTGGTTGGGGAGCCGCAGTCGCGGGAGATCTATGCCTGCA TGGTGCGCCGCGACGATCCGCAGTTCCTCGCGCTGGTCAACCAGACCCTGGCCGATCTCTACGCCTCGGGCGAAATCAAGGGCATCTACCAGCGCTGGTT CGAGCAGCCGATCCCGCCGAAGAACCTCAACCTGGAATTCCCCATGACCGCCGAGCTGCAGGCGATCATCGCCAAGCCCACCAGCGAACCGGTGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCCGCTAGCGTTGCAGGCCGAGGTGGCGGATCAGTGGCTGCGCCTCGGCCAGGCGCTCCCAGACATCGTCGAGCAATTCGGCGGGGTAGTAGGAGGGCA GGTGCGGCAGCTCCTGGCGCGGCACCCAGGCGACTTCGCGGATATCGAACTCGTCGCCACCCAGGCCGCGCAGGTTATCCAGGCTGACCTGGCCATCCCA GGCGTCGACGCGATAGAACAGCTCCATGTGGAAGCGCCCGGCCAGCGGCTCGGCGAACTCGCGTACGTAGACCAGCGGGCCGACTTCCACGGCCAGCCCG GTTTCCTCCCGGCATTCGCGGCGCACGGTGTCGCGGGTGGACTCGTCCTTGTCCGACTCGAAGCCGCCGCCCGGCGGGATCCAGTACTCGTCGCCGGCGA CTGCATGGCGCACCAGCAGGATTTCGTCGTTGCGCAGCAGCAGGCCGGCGGCGCGGATGCGGTGTTGCAGGGGGGAAGTCATTGCCAGTCGAGCCTCGCC
Amino Acid Sequence
>ABC transporter
MKRLALGMLAASSLVCALAQADEALDGTLKKVAERGTITLGYRDASVPFSYLGDNSGQPMGYSVDLAGKVVERIRQKLAKPDLAVKYNLVTSQTRIPLVQ NGTVDLECGSTGVTAERLKQVAFSYGFIYVKGQLLTAKDSGIQGFDDLKGKNVVTTAGTTNERYLKAYNAEHKLGMNVVSAKDHGEAFLMLQSGRAVAFY MDDALLYGEKAKARDPHQWVVVGEPQSREIYACMVRRDDPQFLALVNQTLADLYASGEIKGIYQRWFEQPIPPKNLNLEFPMTAELQAIIAKPTSEPVQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site