Pseudomonas sp. 21, UB43_RS04060

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGCCACTCGCCGGCTGCTTCATCGAAGCTCGCCTCGCTCACTTCGCAGTTGAAGCGGATGCGCTCGCGCAGGCGGTACTTGTCCGCGCAGTGCCGCGCG TACTCGAGGATTTCCGCCTGGGGCGCGAACTTGCGCGACCAGTCGGCCTTGGGTTCGAAGGAGAAGGAGTACAGGTGCGAAGGCACGTCGCAGGCAGCGC CCGGATAGACGTTCTCGCGCCAGCAGCCACCGACGTCGGCAGCCTTTTCGAGGATCAGGAAGTCCTGGATGCCCGCTTGCTGCAGGCGGATCGCCAAGCC CAGGCCGGCGAAGCCGGCGCCGATGATCAGCACGCGCGGGGCGGCCGATCGACGGGAAGGTGTTGTCATTGTTGTGCTCCCGGTTTCGAGGTCCGCACGG CGGCGGATGACAACATCCTAGTGCGACTTCCTGCCAGGGGTTATGGCATAGTCGGACATAAAATTGTGACTTTCGGTCACCCCCGCCCTTCGAGGTCCCG
DNA Sequence for Gene
>UB43_RS04060
ATGCCCGCCACTCCACCCTGGTCGCCCCGGCGCAGCGCCATCAGCGTGCAGCTCATGACCCAGTTCGGCCTCGACCACGGCATGACCCTGGAACAGTGCC TGGACGGCACCGGCCTGGACATCGGCGTGCTCGCCGACCCGGGCGCCGAGGTGGAAGCCACCCAGGAACTGGAGCTGCTGCGCAATATCAACCGGCACAT CGGCCAGCGCCCCGGCATCGGCCTCAAGGCCGGCCTGCGCTATCACCTCAACACCTATGGCATCTGGGGCTTCGCCCTGCTCAGCAGCTCGACCTTCCTC AGCGCCGCGCACCTGGGGCTGCGCTACCTCGACCTGACTTACGCCTTCCACCGCATGACGCTGGAGGAGCACGACGGCGAGGCACACCTGGTGCTGGACG ATGCCGCCGTACCGGAGGACCTGCGCGACTTCCTCATCGACCGCGACGGCGGTGGCGTGCTGCGCATCCAGCGCGACCTCACCAACCAGCCACCGCCGAT CCGCCAGGCGCTGTTCCGCCGCGAGGCGCCGGCCGACCTGCAGCCGTACATCGATGAACTGGGCGTGACGCCGCTCTTTGGCCAGGCGGAGAACCGCATC GTCTTCGACAGCCGCATCCTCGAAATGCCGCTGCCCGGCGCCAATCCCGAGGTGGCACGCCGCTGCGAGGAACAGTGCCGCGCCCTGCTCGCCCGGCGCC AGGTGCGCACCGGGCTGTCCGGGCAGATTCGCGACCGCCTGCTGGGTACGCCGGGGCGGCTACCGGACATGGAGCAACTGGCAGATGAGCTGCACATGAC CTCGCGCACGCTGCGTCGCCGGCTGGAAACCGAAGGCAGCAGCTATCGCGCACTACTGGATGAGGTGCGCCAGGCGCTGGCCGAGGAGTTGCTGGCCACG GGGGCGATTCGTCTGGAGGAGATTGCCGAGCGGCTCGGCTATGGCGAGGTGTCGAACTTCATCCACGCCTTCCGCCGCTGGAAAGGCGTGACGCCGGGGC GCTTCCGCCGCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGCTCGGAAAGCTGGCGCTTAGAAGACCAGCTTGTAGCCGATCATCGCCAGCATCACGGCCAGGCAAGGCCGCAGGATGCCGTCCGGAATGCGCCCGGC GAGGTGGCTGCCGACGTAGATGCCCGGCAACGAACCGATCAGCAGGTAGCCCAGCAGGCCCCAGTCCATGTTGCCCATGCTGGCGTGGCCGAGGCCGGCG ACCAGGGTGAGCGGTACGGCGTGGGCGATCTCGGTGCCCACCAGACGGCGGGTGGCGAGGAAGGGATAGAGGATGAACAGCGCCACGGTGCCCAGCGCGC CAGCGCCGATGGAGGTCAGCGCGACCATCGCGCCGAGGATGGCGCCGGTAATCACGGTCAGGCTGTTCAGCTTCGAGCCGCTGAAGTGGAAGCTGTCGCC AGCGTGGCGCTGGGCAAAGGCCAGCACCTGCTTCTTGAACAGGACCGCCAGCGCAGTGAGCAGCAGCACGACGCCCAGGGCGTTCTTGATCACGGCGTTC
Amino Acid Sequence
>AraC family transcriptional regulator
MPATPPWSPRRSAISVQLMTQFGLDHGMTLEQCLDGTGLDIGVLADPGAEVEATQELELLRNINRHIGQRPGIGLKAGLRYHLNTYGIWGFALLSSSTFL SAAHLGLRYLDLTYAFHRMTLEEHDGEAHLVLDDAAVPEDLRDFLIDRDGGGVLRIQRDLTNQPPPIRQALFRREAPADLQPYIDELGVTPLFGQAENRI VFDSRILEMPLPGANPEVARRCEEQCRALLARRQVRTGLSGQIRDRLLGTPGRLPDMEQLADELHMTSRTLRRRLETEGSSYRALLDEVRQALAEELLAT GAIRLEEIAERLGYGEVSNFIHAFRRWKGVTPGRFRRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site