Pseudomonas sp. 21, UB43_RS03925

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGGTGTCGCGTGCAATTCGCCACGGGGCTTTCGCCGCGGCACCTCCATCGAGCTGCGCATTCCCCTGCTGGGCGACTCCGCCTGCTACCCCGGCGTCAT CGCCTGGAGCCGCAAGCAGGCCAGCGACTACCGCGTGGGTATCGCCTTCATCGACGAAGACACCCTGTTCCGGGCGCGCATGGTCGAGCAGGTCTGCCAG ATCGAGCAGTACCGCCGCCAGCAGGAACAGGCCTGCGGCACCCGCCTGCCGTTCGAGCCCCTGGCGCTGGAATGGATCGCGCAGAACGCCGCCGACTTCC CGATGTTTTGCGCGGTCTGATCGGAGCCCCGCAGAAAGTCGCGCAAATGCCCGTGTCGCGGGCATTTTCCTGCATCGAGCCATTGTCGAGGCTACGCCTG AACGGTTAAGGTTCGGGTTCCCCTTAGCGACACCTCTGCCTGCGCCCCATCGCACGGGGATTTCTGGCGGCCGGCACCCGTGACCTGATTGAGTACCACG
DNA Sequence for Gene
>UB43_RS03925
ATGGCTGATTTACAGATCGACGACCTTAACGTTGCCTCCAACGAGACACTGATCACGCCGGAGCAGCTCAAGCGCGAAATCCCCCTGACCGACGCCGCCC TGCGCACCGTCGCCAACGGCCGCCAGGTCGTGCGCGACATCCTCGACGGCAAGGACCACCGCCTGTTCGTGGTGATCGGCCCCTGCTCGATCCACGACAT CAAGGCCGCCCACGAGTACGCCGAACGTCTGAAGGTGCTGGCCGCGGAAGTCTCCGACACCCTGTTCCTGGTCATGCGCGTGTACTTCGAGAAGCCGCGC ACCACTGTCGGCTGGAAAGGCCTGATCAACGACCCGTACCTGGACGACTCCTTCAAGATCCAGGACGGCTTGCACATCGGCCGCCAGCTGCTGCGCGACC TCGCCGAGATGGGCCTGCCCACCGCCACCGAGGCTCTCGACCCGATCTCCCCGCAGTACCTGCAGGACCTGATCAGCTGGTCGGCCATCGGCGCGCGCAC CACCGAATCCCAGACCCACCGCGAAATGGCCTCCGGCCTGTCCTCGGCGGTCGGCTTCAAGAACGGCACCGACGGCAGCCTGACCGTGGCGATCAACGCC CTGCAGTCGGTTTCCAGCCCGCACCGTTTCCTGGGCATCAACCAGGAAGGCGGCGTTTCCATCGTCACCACCAAGGGCAACGCCTACGGCCACGTGGTGC TGCGCGGCGGCAACGGCAAGCCGAACTATGACTCGGTCAGCGTCGCCCTGTGCGAACAGGAACTGACCAAGGCGAAGATTCCGCTCAACGTGATGGTCGA CTGCAGCCACGCCAACTCCAACAAGGACCCGGCCCTGCAGCCGCTGGTGATGGACAACGTTGCCAACCAGATCGCCGAAGGCAACAACTCCATCGTCGGC CTGATGGTGGAAAGCCACCTGGGCTGGGGCGCTCAGCCGATCCCGAAGGACCTGTGCCAGCTGCAGTACGGCGTGTCGATCACCGATGCCTGCATCGATT GGGACACCACCGAGAAGGCCGTGCGCAGCATGCACGCCAAGCTCAAGGACGTCCTGCCCAAGCGCCAGCGCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCTTCGAGCGGATAGGAAAGAAGCCGGGCAAATGCCCGGCTTTTTCTTTGGCAAATTCCGCACCGGTGCTTTTTGTAGGAGCGAGCTTGCTCGCGAATC GCTTGACGCTGGGCAGAAACACCGTTTGCGAGCAGGCTCGCTCCTACAGAACTGCCGACGCGGCCAGAAGTGGAATTCCAGCGGGCACAAAAAAGCCCGG CATTCGCCGGGCTTCCTGTTTCCATACCCTGAAGATCAGAGCGCGGTATCGGTGTGACGCTGGCGGCGTTCCAGGTAGCGCTCGACGTAGGAGCACGACG GGATGACGCTGTAGCCCTTGCGCTCGGCGAACTGCAGCGCATGTTCGGTGAGGGCGGCGGCGATGCCGCGGCCGCGCAGGCTGTCAGGAACGAAAGTGCG ATAGATGTCGAGCGTCTGCTTGCCCAGATCCATGTAGGCCAGATAGGCGCGATGACCATCAACAGTCGTTACGAACTGGTGGCTGGTTTCATCATGCTGG
Amino Acid Sequence
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLQIDDLNVASNETLITPEQLKREIPLTDAALRTVANGRQVVRDILDGKDHRLFVVIGPCSIHDIKAAHEYAERLKVLAAEVSDTLFLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRQLLRDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGSLTVAINA LQSVSSPHRFLGINQEGGVSIVTTKGNAYGHVVLRGGNGKPNYDSVSVALCEQELTKAKIPLNVMVDCSHANSNKDPALQPLVMDNVANQIAEGNNSIVG LMVESHLGWGAQPIPKDLCQLQYGVSITDACIDWDTTEKAVRSMHAKLKDVLPKRQRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site