Pseudomonas sp. 21, UB43_RS03365

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGTTCCGAAAGCCCTGATCGGCAACGAAGTCAATCGTCTGCGCGTCCAGGCTGTCCAGCAGTTCGGTGGCAACATCAAGCCCGACCAACTGCCGGCTGAA CTGTTCGAAGAGCAGGCCAAGCGCCGCGTCGTGCTGGGTCTGATCGTCGCTGAGCTGGTCAAGCAGCACGAGCTGAAGGCCGACGAAGCCCGCGTTCGCG AAATGATCGAAGAGATGGCTTCCGCTTACCAGGAGCCGGAACAAGTTGTTTCCTGGTACTACAAGAACGACCAGCAACTGAACGAAGTTCGTTCGGTTGT ACTGGAAGAACAAGTTGTAGATACTGTCCTGCAGAAGGCCAATGTGACCGACAAGCAGGTATCCTACGAAGACGCGGTCAAGCCTGCAGAAGCTCCGCAA GCGGCCTGATCCAGCTTCGTTCGATTGTCACAAGCCAGCCTTCGGGCTGGCTTGTGCGTCTATAGAGACATGACTTTTTATTAGGGAGTGATCGTCGGAC
DNA Sequence for Gene
>UB43_RS03365
ATGCATAATCCTTATATGCCGCAAGTTCCGAACATTCAGGCCGCTGGCGGTCTGGTGCCGATGGTGGTGGAGCAGTCCGCCCGCGGTGAGCGTTCCTACG ACATCTATTCGCGCCTGCTGAAGGAGCGGATCATCTTCCTGGTCGGCCAGGTCGAGGACTACATGGCCAACCTCGTGGTGGCCCAGTTGCTGTTCCTCGA AGCCGAGAACCCGGACAAGGACATCCACCTCTACATCAACTCGCCGGGTGGCTCCGTGACCGCTGGCATGTCGATCTACGACACCATGCAGTTCATCAAG CCCGACGTGTCCACCATCTGCGTGGGCCAGGCGTGCAGCATGGGTGCCCTGCTGCTGGCTGGCGGCGCCGCTGGCAAGCGTTATTGCCTGCCGCACTCGC GCATGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGCCAGGCCTCGGACATCGAGATCCACGCCAAGGAAATCCTCTTCATCAAGGAGCGCCTGAACCA GGTGCTGGCGCACCACACCGGCCAGCCGCTGGATGTCATCGCCCGCGATACCGACCGTGACCGCTTCATGAGTGGTGACGATGCTGTCAAATACGGTCTG ATCGATCAGGTCTTCACTCAGCGTCCCACCGCTAGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCTCTCCGCTGTACCGCGGCCGGTAATCCGGCCGCTCGCGGGCTTGAAAATGCCTGCGAATGCCTTCATCTTGTCCTTCACGTATATCCCCGATTGGAA CGATCGAATGACTGACACCCGCAACGGCGAGGACAACGGCAAGCTGCTGTATTGCTCCTTCTGCGGCAAGAGCCAGCACGAAGTGCGCAAGTTGATTGCC GGCCCCTCGGTCTTTATCTGCGACGAGTGCGTCGACCTGTGCAATGACATCATCCGTGAGGAGGTGCAGGAAGCACAGGCGGAGAGCAGTGCGCACAAGC TTCCGGCGCCGAAAGAGATCCGCACCATCCTCGATCAGTACGTGATCGGCCAGGAACGTGCCAAGAAAACCCTGGCAGTAGCGGTGTACAACCACTACAA ACGCCTGAACCAGCGTGAGCGCAAGGACGACGTCGAACTGGGCAAGAGCAACATCCTGCTGATCGGGCCGACCGGTTCGGGCAAGACCTTGCTCGCCGAG
Amino Acid Sequence
>Clp protease ClpP
MHNPYMPQVPNIQAAGGLVPMVVEQSARGERSYDIYSRLLKERIIFLVGQVEDYMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIK PDVSTICVGQACSMGALLLAGGAAGKRYCLPHSRMMIHQPLGGFQGQASDIEIHAKEILFIKERLNQVLAHHTGQPLDVIARDTDRDRFMSGDDAVKYGL IDQVFTQRPTAS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site