Pseudomonas sp. 21, UB43_RS03335

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCGGCCAGCGCTTCCTGGAAATCTGGTCGGGCCTGCCGGTGCTCTACCTGCTGATCATCCTCGCCAGCTTCGTGCAGCCGAGTTTCTGGTGGCTGCTG GGAATCATGCTGCTGTTCTCCTGGATGAGCCTGGTGGACGTGGTCCGCGCCGAGTTCCTCCGTGGCCGGAACCTGGAGTACGTGCGCGCGGCGCGCGCCC TGGGCATGCGCAACGGCGCGATCATGTTCCGCCACATCCTGCCCAACGCGATGATCTCCACCCTGACCTTCATGCCCTTCATCCTCACCGGCGCGATCGG CACCCTGACCTCCCTGGACTTCCTCGGCTTCGGCCTGCCCGCCGGCGCGCCGTCGCTGGGCGAGCTGGTCGCCCAGGGCAAGTCCAACCTGCAGGCGCCC TGGCTGGGCATCACCGCCTTCGTGGTGCTGGCCGTGATGCTGAGCCTGCTGGTGTTCATCGGCGAAGCCGCCCGCGATGCCTTCGACCCGAGGAAGTGAC
DNA Sequence for Gene
>UB43_RS03335
ATGAGCCAGAACGAGAACCTCATCGAAGTGCGCGACCTGTCCGTCGATTTCCGCTGCGGCGACGAACAGGTGCGCGCGGTCGAACACATCAGCTTCGACA TCCGCAAGGGCGAGACCCTGGCGCTGGTAGGCGAAAGCGGCTCCGGCAAGTCGGTCACCGCGCACTCGATCCTGCGCTTGCTGCCCTACCCCACCGCCAG CCACCCTTCCGGCAGCGTCCAGTACGCCGGCAAGGACCTGCTCAAGCTGCCCGAGCGCAAACTTCGGAGTATCCGCGGCAACCGCATCGCCATGGTGTTC CAGGAACCCATGACCTCGCTGAACCCGCTGCACAGCATCGAGAAGCAGATCGGTGAAGTACTGGCGCTGCACAAGGGCATGAACGGCGCCCAGGCCCGCG CGCGCACGCTGGAACTGCTAGAGCTGGTGGGCATCCCCAATCCCGCCAGCCGGCTCAAGGCCTACCCCCACGAACTTTCCGGCGGCCAGCGCCAGCGGGT GATGATCGCCATGGCCCTGGCCTGCGAGCCGGAGCTGCTGATCGCCGACGAACCGACCACGGCGCTGGACGTCACGGTGCAGCTGAAGATCCTCGACCTG CTGCGCGACCTGCAGCAGCGCCTGGGCATGGCCATGCTGCTGATCACCCACGACCTCAACCTGGTGCGGCGCATCGCCCATCGCGTCTGCGTGATGAAAC GCGGCTGCATCGTCGAGCAGGCCGATTGCGAAGCCCTCTTCGAGGCCCCCCAGCACCCCTACACGCGTGAATTGCTCGGAGCCGAGCCCAGTGGTACCCC CGCACAGAACGAGCCAGGAGCGCCCTTGCTGGAGGTCGACGACCTGCGCGTGTGGTTCCCGATCAAGAAAGGCGTGTTCCGCAAGACCGTCGATCACGTC AAGGCCGTGGACGGCATCGACTTCAGCCTGCCGCGTGGCCAGACCCTGGGCATCGTCGGCGAGAGCGGCTCGGGCAAGTCGACCCTCGGCCTGGCCATCC TGCGCCTGATCAACAGCCAGGGCGGCATCCGCTTCGAGGGCCAGTCCATCGAAGGCATGAACCAGGCGCAAGTCAGGCCCCTGCGTCGCGAGATGCAGGT AGTCTTCCAGGATCCGTTCGGCAGCCTCAGCCCGCGCATGTCGGTGGGCCAGATCGTTGGCGAAGGCCTGGAAATCCATGGCATGGGCACACCCGAGGAG CGCGAGCAGGCGATCATCGAGGCGCTCAAGGAAGTCGGGCTCGACCCGGATACCCGCCACCGCTATCCCCACGAGTTCTCCGGTGGCCAGCGGCAGCGCA TCGCCATCGCCCGCGCGCTGGTGCTCAAGCCGGCGCTGATCCTGCTGGACGAGCCGACCTCGGCGCTGGACCGCACCGTGCAGCGCCAGGTTGTCGAGCT GCTGCGCGGGCTGCAGGCCAAGTACAACCTGACCTACCTGTTCATCAGCCACGACCTGGCGGTGGTGAAAGCCCTCAGCCACCAGTTGATGGTGATCCGC CACGGCAAGGTGGTCGAACAGGGCATGGCCGAGGATGTCTTCGCCGCACCGCAGCATGCGTACACACAGCAACTGCTGGAAGCAGCCTTCATGGTCCCGG CAGCGAGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCATTACATGATCAAGGAGTGGATATGGGATTTCTCACCGGCAAGCGCGTACTGATCGTCGGTGTCGCCAGCAAGCTGTCCATCGCCTCCGGCATCGCC GCGGCGATGCACCGGGAAGGCGCCGAGCTCGCCTTCACCTACCAGAACGACAAGCTCAAGGGCCGCGTGGAAGAGTTCACTGCTGGCTGGGGTTCCAGCG CGGAGCTGTGCTTCCCCTGTGACGTAGCCAACGACGCGGACATCGCAGCCGTGTTCGCCGAGCTGGGGAAGCAGTGGGATGGCCTGGACTGCATCGTCCA CTCGGTGGGCTTCGCACCGGGCGACCAGCTCGACGGTGACTTCACCGAAGTCACCACCCGCGAAGGTTTCCGCATCGCCCACGACATCAGCGCCTACAGC TTCATCGCCCTGGCCAAGGCCGGCCGCGAACTTATGCAGGGTCGCAACGGCAGCCTGCTCACCCTCTCCTACCTGGGCGCCGAGCGCACGATGCCCAACT
Amino Acid Sequence
>microcin ABC transporter ATP-binding protein
MSQNENLIEVRDLSVDFRCGDEQVRAVEHISFDIRKGETLALVGESGSGKSVTAHSILRLLPYPTASHPSGSVQYAGKDLLKLPERKLRSIRGNRIAMVF QEPMTSLNPLHSIEKQIGEVLALHKGMNGAQARARTLELLELVGIPNPASRLKAYPHELSGGQRQRVMIAMALACEPELLIADEPTTALDVTVQLKILDL LRDLQQRLGMAMLLITHDLNLVRRIAHRVCVMKRGCIVEQADCEALFEAPQHPYTRELLGAEPSGTPAQNEPGAPLLEVDDLRVWFPIKKGVFRKTVDHV KAVDGIDFSLPRGQTLGIVGESGSGKSTLGLAILRLINSQGGIRFEGQSIEGMNQAQVRPLRREMQVVFQDPFGSLSPRMSVGQIVGEGLEIHGMGTPEE REQAIIEALKEVGLDPDTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRGLQAKYNLTYLFISHDLAVVKALSHQLMVIR HGKVVEQGMAEDVFAAPQHAYTQQLLEAAFMVPAAS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site