Pseudomonas sp. 21, UB43_RS00315

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 21 contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTTCGCCTTCGGCGCGGGACACGGCAGCCTTGAGCGGCGCCGGGTCGATCTGGAACAGCAGGTCGCCGGCCTTGACGTCGGCGCCTTCCTCGAAGCGCTT CTGCACCACGATGCCCGCCACCCGCGCCCGCACCTCGGCGACGCGCATCGGCTCGATGCGCCCCGGCAACTCCGAGGTCAGGGTGAGGGGTTCGGTCGCG ACTGCCACCACATCCACCGGGCGCGCCGCCTCCGCGGCGGCCTGCGGCTCGCCGGATTGTCCGCAACCCGCCAGCGCCAATGCTGCCACCAACGCACTGA TTGTCCCTACTGCACGCAACCTGCCCATGTTTCACCCGGGATCTGTCTACCTGGAAAGGTGCGTATGATCCTTTCAAATTCAAAATGAGTCAATAAAGTC TCATTTGCTTCTGTGGTGTATAAAATGTGTCATGACCTTTCAAAAGAGAGGCCTTTTTCTGCACAATGAGACGATCCGTCACCTGACACGAGGCCCCCGA
DNA Sequence for Gene
>UB43_RS00315
ATGACTCTCTCCGCCCACGATGAACGTCTGCTCAAGGCGCTGGCCGTCGCCATCGTCGACCGCCCTCGGGCGACGCTGAAGGAGCTGGCGGAATCGGCGG GGGTGAGCAAGGCGACGCTGCACCGCTTCTGCGGCACCCGTGACGGGTTGATGGAAATGCTCGAGGACTATGGTCATGTGGTGATCCGGCAGATCCTTGA AGCCGCCGAGCTGCAGCGTGCCGAGCCATTGGAAGCACTGCGCCAACTGATCGCCGAACACCTCAAGCACCGCGACATGCTGAACTTCCTGCTGTTCCAG TACCGCGCCGAGAACCTCGACATGCAGGCGACGACCGAGCGCTGGAGCTACTACACCGAAGCAGTGGATGCTTTCTTCCTGCGCGGCCAGCAGAGCGGCA GGTTCCGCATCGACATCACTGCCGCGGTGTTCACCGAACTCTTCCTCTCCATGCTCTACGGCATGGTCGATGCCGAGCGCTACGGCCGCGCGGCCAGCTC CAGTTCCGCGCAGGTGCTGGAGCAGTTGTTTCTCCATGGTGCGCAGGTCAAGACCCAGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCCGCACTGCACTGAAGGAAAAGCCACTTTCTTTGGCGGATTGTGTCTATGCCAGCCCGTTCGGAGCTCACTGAAAAGAATTGTCTGTAGTCCCGGAGA ACTTTCCCCTGACCTTTCCGGCGCTCTCCCGGACCATTCTTATATTTCTAGGTATTAGGTGGCTCTTATGGTGGCCGACTGAGTCAGCAGGTCGGCTATA TCGGGTTTTTCAGCCTGTCTCCTGCGCTCGCACCCATTGCACGCAAGGAGGTCAGGCATGCTTCAGGAAGCACGGATTTTATTCGATCACAGCCGCCATA CCCTGAACGTCAGGGACGTTGACGCGCCGCTTGATGTGCTGGCCTTCGAGGGTGACGAAGCCCTCAGCCAGCCTTTCGCCTACCGCATCGAATTCACCAG CACTCACCTTGATCTCGATGCCAATACCTTCCTGCTCAAGGACGCCAGTTTCAGCCTGCGCGCCCCGCCCGAGCAGCTCGGCATCCCCGGCTACACCCCA
Amino Acid Sequence
>transcriptional regulator
MTLSAHDERLLKALAVAIVDRPRATLKELAESAGVSKATLHRFCGTRDGLMEMLEDYGHVVIRQILEAAELQRAEPLEALRQLIAEHLKHRDMLNFLLFQ YRAENLDMQATTERWSYYTEAVDAFFLRGQQSGRFRIDITAAVFTELFLSMLYGMVDAERYGRAASSSSAQVLEQLFLHGAQVKTQA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site