Pseudomonas sp. 20_BN, BN1079_RS15915
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 20_BN genome assembly PRJEB6478_assembly_1,contig CONTIG000001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCGCTGGTGTTCGGCGGGCCGTTTCTCTGGGAGATCCCCGAGCTGCAGCGCTTCAACATTCGCGGCGGCTGGGTGGTCATTCCCGAGCTGGTGTCCATC GTGCTGGCGTTGACCATCTACACGGCAGCCTTTATCGGCGAAACCGTGCGCGCCGGCATCCAATCGGTCAGTCATGGCCAGACCGAAGCGGCGGCCTCCC TGGGTTTGCGGCCCGGTCGCATACTGCGGCTGGTGATCGTGCCGCAGGCGCTGCGGGTGATCATCCCGCCCTTGACCAGCCAGTACCTGAACCTGGCGAA GAACTCCTCGCTGGCCGCGGCCATCGGCTACCCGGACATGGTCTCGCTGTTCGCCGGCACGGTGCTCAACCAGACCGGCCAGGCCATCGAGACCATGGCC ATCACCATGAGCGTGTACCTGGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATCGCGCTGATCGAGCGGTGAGGGCAAAGCC
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| DNA Sequence for Gene |
>BN1079_RS15915
ATGACGACGCATACCTTCAAGCCCGACCTGCCGGCCCCTTCGCGCAACATCGGCGTGCTCGGCTGGCTGCGCGCCAACCTGTTTTCCAGCTGGTTCAACG CGCTGCTGACCCTGCTGGGGCTCTACCTGATCTGGCTGGTGGTGCCGCCAATCATCGACTGGGCCATCATCAAGGCGGACTGGACTGGAGACTCGCGCGC CGACTGTTCGCGCGAGGGCGCTTGCTGGGTATTTATCCAGACGCGTTTCAGCCAGTTCATGTACGGCTTCTATCCCACGGAGCTGCGCTGGCGTGTGGAT GCCGCCGCCTGGCTGGCAATCCTGGGCGCGGCGCCGCTGCTTATCCGGCGCATGCCGCACAAGGTGCGCTATGGGATCGCCTACCTGCTGCTGTACCCGC TGCTGGCCTACTGGCTGCTGCACGGCGGTTTCCTCGGCCTGGAAACGGTGCCGACCTCGCGCTGGGGCGGGTTGATGCTGACCATCGTCATCGCTGCAGT GGGCATCGCTGGCGCCTTGCCGCTGGGCATTCTGCTGGCGCTTGGCCGTCGTTCGGATATGCCGGCGATTCGCGTGCTGTGCGTGACCTTCATCGAGTTC TGGCGCGGGGTACCGCTGATCACCGTGCTGTTCATGTCCTCGGTGATGCTGCCGCTGTTCCTGCCCGAGCAGATGAACCTCGACAAGCTGATGCGCGCCA TGCTGATGGTGGTCTTCTTCGAGGCCGCCTACATCGCCGAAGTGGTGCGCGGCGGCCTGCAGGCGATCCCGCGCGGCCAGTACGAAGCGGCGGCGGCGAT GGGCCTGGGCTACTGGCGCAGCATGGTCCTGGTGATCCTGCCCCAGGCGCTGAAGATGGTCATTCCCGGCATCGTCAACACCTTCATCGCGCTGTTCAAG GATACCAGCCTGGTGATCATCATTGGCCTGTTCGACTTCCTCAACAGCATCAAGCGCGCCACCGCCGACCCGGCCTGGCTAGGCATGTCCACCGAAGGCT ATGTGTTCGCCGCATTGGTCTACTGGATGTTCTGCTTCAGCATGTCGCGCTACTCCATCCATCTTGAGCGCAAGCTCGATACCGGCCATCGGCACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGAGGCATATGAGTGATGCAAAGCTGCAAACCGGGCAGGCTGCCGAGTCGGTCATTCAGATGCAGGGCGTGAACAAGTGGTTCGGCCAGTTCCACGTGC TCAAGGACATCGACCTGGAGGTCACCCAGGGCGAGCGCATCGTGCTTTGCGGGCCGTCCGGCTCCGGTAAGTCCACCACCATTCGCTGCCTCAACCGGCT GGAGGAGCATCAGAAGGGGCGCATCGTGATCAATGGCGTGGAGCTGACCAGCGACCTCAAGCATATCGAGACGGTGCGCAGCGAAGTCGGCATGGTGTTC CAGCATTTCAACCTGTTTCCGCACCTGACCGTGCTGCAGAACTGCACCCTGGCGCCGATGTGGGTGCGCAAGATGCCCAGGCGCCAGGCCGAGGAAATCG CCATGGACTACCTGGAAAAGGTGCGCATTCCCGAGCAGGCCGACAAGTTTCCGGGGCAGCTCTCAGGCGGCCAGCAGCAGCGTGTGGCCATTGCTCGCGC
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| Amino Acid Sequence |
>amino acid ABC transporter permease
MTTHTFKPDLPAPSRNIGVLGWLRANLFSSWFNALLTLLGLYLIWLVVPPIIDWAIIKADWTGDSRADCSREGACWVFIQTRFSQFMYGFYPTELRWRVD AAAWLAILGAAPLLIRRMPHKVRYGIAYLLLYPLLAYWLLHGGFLGLETVPTSRWGGLMLTIVIAAVGIAGALPLGILLALGRRSDMPAIRVLCVTFIEF WRGVPLITVLFMSSVMLPLFLPEQMNLDKLMRAMLMVVFFEAAYIAEVVRGGLQAIPRGQYEAAAAMGLGYWRSMVLVILPQALKMVIPGIVNTFIALFK DTSLVIIIGLFDFLNSIKRATADPAWLGMSTEGYVFAALVYWMFCFSMSRYSIHLERKLDTGHRH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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