Pseudomonas sp. 20_BN, BN1079_RS15020 (obgE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 20_BN genome assembly PRJEB6478_assembly_1,contig CONTIG000001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGGTTCACTGAGGTCAAAATCACCGGTATTCAGGGCTAATCGGGCCTGAATCCCCTTATAGGAGTATTGAACTCATGGCACACAAAAAAGCTGGCGGTT CTACCCGCAACGGTCGCGACTCAGAAGCCAAACGCCTTGGCGTGAAGATGTATGGCGGCCAGAAGATTGTTCCCGGCAACATCATCGTGCGTCAGCGCGG CACCCAGTTCCACGCCGGTTACGGCGTTGGCATGGGCAAGGACCACACCCTGTTCGCTAAAGTCGAAGGCGTGGTCAAGTTCGAAGTGAAGGGCGCTCTT GGCCGTCGCTACGTGAGCGTCGTCGCGGCCTAATCGCGGCGTTGCTGGAAAAGCCCTGTCATGCGACGGGGCTTTTTTGTTTCTGTATCCTGTGAGGCTC TTGCAAAGAAGCTGCTCGGTGCTCATTCAGTTTTCGCTGGGTTTTTTGCAAGACCCTTATTCCAGTTTTTTAGCCCGTCCCTGCGGCGGGAGGCGTTCCC
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| DNA Sequence for Gene |
>BN1079_RS15020
|obgE
ATGAAATTCGTCGATGAAGTATCGATTTTTGTAAAGGCCGGCGACGGCGGCAACGGCATGATGAGTTTTCGTCGCGAAAAATTCATCGAAAAAGGCGGCC CCAACGGTGGTGACGGCGGCGACGGTGGCTCCATTTATCTGGTGGCCGACGAAAACCTCAATACCCTGGTCGATTACCGCTACACCCGTCGCTTCAATGC GCCCAATGGTGAGAAGGGCGGCAGCTCCGAACGTACTGGCGCCAAGGGGGAAGATCTGTTCCTGCCGGTGCCGGTGGGTACTACGGTGATCGATGCCGCT ACCCAGGACGTAATTGGTGATCTGACCAAGCCGGGTCAGCAGCTGCTGGTCGCTCAGGGTGGCTGGCATGGGCTGGGCAATACGCGCTTCAAGTCCAGCA CCAACCGTGCGCCGCGGCAGACCACGCCGGGCAAGCCGGGTGATGCGCGTGATCTCAAGCTGGAGCTGAAGGTGCTGGCTGATGTCGGCCTGCTGGGCAT GCCGAATGCGGGCAAGAGCACCTTTATCCGTGCCGTGTCGGCGGCCAAGCCGAAAGTCGCCGATTATCCGTTCACCACCTTGATTCCCAATCTGGGCGTT GTCAGCGTCGGGCGCTACAAGAGTTTTGTCGTGGCTGATATTCCGGGGCTGATCGAGGGAGCTTCGGAAGGTGCTGGCCTGGGCATTCGTTTCCTCAAGC ATCTGGCGCGGACGCGTCTGTTGCTGCATCTGGTGGACATGGCGCCGCTGGACGAGAGCGATCCGGCCGATGCCGCCGAGATCATCCTCAGCGAGCTGGA GAAGTTCAGCCCGGCCCTGTCTCAGCGTGATCGTTGGCTGGTGCTGAACAAGGCTGATCAGCTGCTTGAGGAGGAGCGCGAAGAGCGCATGCGGCAGGTG ATCGAGCGTCTCGACTGGGAAGGTCCGGTATTTGTCATCTCGGCACTGGAGCGTGAGGGCACCGAAGAGCTGAGCCAGGCGATCATGCGCTATCTCGATG AGCGGACGCTGCGCATCGCCGAGGATCCGGCCTACGCTGAGGCATTGGCTGATCTCGATCAGCAGATCGAAGATGAGGCGCGTGCGCGACTGCAGGAGCT TGATGATCAGCGGGCGCTGCGACGTGCTGGCGTCAAGGCGGCAGACGATGTCGATGACGACGACTTCGATGATGACGACGATGACGAGGGTGGTGCGGAA ATCTTCTACGTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGCTTGGGTCTCGCGCTGCTGCGAGGCTTTCGGAAGGTGGGCGGCTGTGCTGCTCGCTGCAATGAATTGACTGGTTAGTGGAATAGGCGGGATCGATGC GCGACAAGGTGAGCGGTGCTCGGCGCTGGGTAGTGAAGATCGGCAGTGCGTTGCTGACGGCCGATGGGCGTGGCCTCGATCAGGCGGCGATGGCGGTCTG GGTCGACCAGATGGTTGCGCTGCGTGAGGCGGGTGTCGAGCTGGTGCTGGTATCTTCCGGTGCTGTCGCTGCGGGCATGAGTCGCCTTGGCTGGAGTGCT CGTCCCAGGGCTGTGCACGAATTGCAGGCTGCTGCAGCTGTAGGGCAGATGGGGCTGATTCGAGCCTGGGAGACAAGCTTCGCCCGTTGCGAACAGCAAA CCGCACAGATCCTCGTCACCCATGACGACCTCTCCGACCGCAAGCGCTATCTCAATGCGCGCAGCACCTTGCGCACCTTGCTCGATCTGGATGTGGTGCC
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| Amino Acid Sequence |
>GTPase CgtA
MKFVDEVSIFVKAGDGGNGMMSFRREKFIEKGGPNGGDGGDGGSIYLVADENLNTLVDYRYTRRFNAPNGEKGGSSERTGAKGEDLFLPVPVGTTVIDAA TQDVIGDLTKPGQQLLVAQGGWHGLGNTRFKSSTNRAPRQTTPGKPGDARDLKLELKVLADVGLLGMPNAGKSTFIRAVSAAKPKVADYPFTTLIPNLGV VSVGRYKSFVVADIPGLIEGASEGAGLGIRFLKHLARTRLLLHLVDMAPLDESDPADAAEIILSELEKFSPALSQRDRWLVLNKADQLLEEEREERMRQV IERLDWEGPVFVISALEREGTEELSQAIMRYLDERTLRIAEDPAYAEALADLDQQIEDEARARLQELDDQRALRRAGVKAADDVDDDDFDDDDDDEGGAE IFYVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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