Pseudomonas sp. 20_BN, BN1079_RS13390

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:3.20.20.450:FF:000001	Cyclic di-GMP phosphodiesterase yahA	-	-	528	780	6.9E-94
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	345	517	2.3E-50
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	360	524	1.6E-46
Pfam	PF13426	PAS domain	IPR000014	PAS domain	242	343	1.3E-13
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	528	780	3.0E-103
CDD	cd01948	EAL	IPR001633	EAL domain	533	772	3.20894E-116
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	532	778	5.23E-93
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	361	518	2.2E-41
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	235	351	2.4E-17
Pfam	PF00563	EAL domain	IPR001633	EAL domain	533	767	8.8E-77
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	358	512	2.1E-36
SMART	SM00086	pac_2	IPR001610	PAC motif	303	345	2.4E-4
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	357	515	5.22624E-49
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	236	343	1.24E-22
SMART	SM00091	pas_2	IPR000014	PAS domain	231	297	9.0E-6
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	356	515	6.4E-28
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	231	359	2.3E-28
CDD	cd00130	PAS	IPR000014	PAS domain	240	342	7.69658E-10
SMART	SM00052	duf2_2	IPR001633	EAL domain	527	772	4.1E-118
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	235	779	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.