Pseudomonas sp. 12M76_air, VG99_RS14100
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 12M76_air. [Details] | |
| DNA Sequence Upstream of Gene |
GACTACAGCGTCTTCCAGGAAGGGTTCGCTGGTAGCGTCGACCCAGACGCGGAAAGCGTCCAGCGCGATAACGGTGTCTTCGGGCTTTTCTTCACCGGGC TTACAGTAGGCGATGCAGGTTTCCGCATAGGGCGTACCGGGCTGGGTGATGAACACCCGAATACCGATGCCGTCAGTGTCCTGCTTGGATAACAACTCCG CCAGATAGGTCTGGGCAGCCTCGGTAAGGTGTATGCCTGCCATGAAATGCCTCGTGTTCGATGACTTGATGCCGGCTATTGTACGGGATACGCGCCCCCG AATAAAGTCCCACCGTTTTACTTGGTTATTATCCGGCCGAGCGCAAAGCCGCTGCCCAGACGACTCGATTCCGCATGCAGGCGGCGTTTATCTGCAGCTG CTTGAATCAAATGAAAGATGCCCTTGAGTTCCTTTCATTCAGCCACCTCTCCGCTTCTGGTAGACTGACCGGCTTTATTTACCTTGATTCCGGAGTCTTC
|
|
| DNA Sequence for Gene |
>VG99_RS14100
ATGTCTGACCTGACCACCCGCCTGACCGCTCTGAATGATGCTCTGCGCCAGCGCATTCTGATACTCGACGGTGGCATGGGCACCATGATCCAGAGCTACC GACTGGAAGAAGCCGATTTTCGCGGCGAGCGCTTCGCCGACTGGCCGCGCGACCTCAAGGGCAACAACGACCTGCTGGTGCTGACCCGCCCCGATGCCAT CGCAGCCATCGAGAAGGCCTACCTGGATGCCGGCGCCGACATCATCGAGACCAACACCTTCAACTCCACCCGCGTCTCCCAGTCCGACTATGGTATGGAA GAGCTGGCCTACGAGCTGAACCTGGAGGGCGCGCGCCTCGCCCGCCGCGTATGTGACGAGAAGACCGCTGAAACGCCGGATCGTCCGCGCTTCGTTGCCG GGGTACTCGGGCCAACCAGCCGCACCTGCTCGTTGTCGCCGGACGTGAACAATCCCGGCTACCGCAATATCACCTTCGATGCGCTGGTGGAAAACTACAG CGAAGCTACCCGCGGCCTGATCGACGGCGGCGCCGACCTGATCCTGATCGAGACCATTTTCGATACCCTCAACGCCAAGGCGGCGATCTTTGCCGTGCAG GGCGTGTTCGAAGAGCTGGGTGTCGAGCTGCCGATCATGATCTCGGGCACCATTACCGATGCCTCCGGCCGTACCCTGTCCGGCCAGACCACCGAAGCCT TCTGGAACTCGGTGCGCCACGCCAAGCCGATTTCCGTCGGTCTGAACTGCGCCCTGGGGCCCAAGGAACTGCGCCCCTACCTGGAAGAGCTGTCCGGCAA GGCCGATACCTATGTATCCGCCCACCCCAACGCCGGCCTGCCCAACGCCTTCGGTGAATATGACGAGTCGCCGGAAGACATGGCGGAGATCGTCGGCGAA TTTGCCGCCTCCGGCTTCCTGAATATCGTCGGCGGCTGCTGTGGCACCACGCCGGCCCACATCGAAGCCATCGCCAACGCCGTGAGCAGCTACCCGCCGC GGCAGATCCCCGATATCCCCAAGGCCTGCCGGTTGTCCGGCCTGGAGCCATTCACCATCGACCGCAGCTCGCTGTTCGTCAACGTCGGTGAGCGCACCAA CATTACCGGCAGCGCCAAGTTCGCCCGCCTGATCCGCGAGGACAACTACACCGAGGCGCTGGAGGTCGCCCTGCAGCAGGTCGAGGCCGGCGCCCAGGTG ATCGACATCAACATGGACGAGGGCATGCTGGATTCGAAGAAGGCGATGGTGACCTTCCTCAATCTCATCGCCGGCGAGCCGGATATCTCCCGGGTGCCGA TCATGATCGACTCCTCCAAGTGGGACATCATCGAGGCCGGCCTCAAGTGCATCCAGGGCAAGGGCATCGTCAACTCCATCTCCATGAAGGAAGGGGTCGA AGAATTCAAGAAGCACGCCCGCCTGTGCAAACGCTACGGCGCCGCCGTTGTAGTCATGGCCTTCGATGAGCAGGGCCAGGCCGATACCGCCGCGCGCAAG AAGGAAATCTGCCAGCGTTCCTACGACATCCTGGTCAACGAAGTCGGCTTCCCCCCGGAAGACATCATCTTCGACCCGAACATCTTTGCCGTGGCCACCG GCATCGAGGAGCACAACAACTACGCGGTGGATTTCATCGAGGCCTGCGCCTTTATCCGCGACCACCTGCCCCATGCCCTGACCTCGGGCGGCGTGTCCAA TGTGTCCTTCTCGTTCCGCGGCAACAACCCGGTGCGCGAGGCGATCCATTCGGTGTTCCTCTACCACGCGATTAAGGCCGGCCTGACCATGGGTATCGTC AACGCCGGTCAGCTGGAGATCTACGATGCGATCCCCGCCGACCTGCGCAACAAGGTCGAGGACGTCATCCTCAACCGCCACCCGGGGGCGACCGAGGCGC TGCTCAATATCGCCGAGGACTACCGCGGCGACGGTTCGGTTAAGGAAGTGGAAAACGAGGAATGGCGCAGCCTGCCCGTCGACAAGCGCCTGGAGCACGC TCTGGTGAAGGGCATCACCGCCTTCATCGTCGAAGATACCGAAGAGGCGCGCCAGCAGGCTAACCGCCCCATCGAGGTCATCGAGGGTCCGCTGATGTCC GGCATGAACGTGGTCGGCGACCTGTTCGGTTCGGGCAAGATGTTCCTGCCCCAGGTGGTCAAATCCGCCCGGGTGATGAAGCAGGCGGTGGCGCACCTGA TCCCCTTCATCGAGGCGGAAAAAGGCGACAAGCCGGAAGCCAAGGGCAAGATTCTCATGGCCACGGTAAAGGGCGACGTGCACGATATCGGCAAGAACAT CGTCGCCGTGGTGCTCGGTTGCAACGGCTACGACATCGTCGACCTGGGCGTGATGGTGCCGGCGGACAAGATCCTCAAGACCGCCATCGAGGAAAAGTGC GACATCATTGGCCTGTCCGGGCTGATCACCCCCTCGCTGGACGAGATGGTCCACGTCGCCCGGGAAATGCAGCGCCAGGACTTCCACCTGCCGCTGATGA TCGGTGGCGCGACCACCTCCAAGGCGCACACGGCAGTGAAGATTGACCCGCACTACAAGAACGACGCCGTGGTCTACGTCACCGATGCCTCCCGCGCCGT CGGCGTTGCCACCACGCTGCTGTCCAAGGAGATGAAGCCCGAGTACACCGGCAAGATTCGCGAGGAGTATGCGGTCATCCGCGAGCGTACCGCCAACCGC GCCTCGCGCACCGAGCGGCTGAGCTACGCCAAGGCCCTGGCCGCCGGGCCGCAATTCGACTGGTCGGAACACTCCCCGACCAAGCCGAGCTTCCTGGGCC GCAAGGTGCTGGAAGACATCGACCTGCGCGTGCTCGAGCAATACATCGACTGGACGCCTTTCTTCATCTCCTGGAACCTGGCCGGCAAGTATCCCCGCAT CCTGGAAGACGAGGTGGTCGGCGAGGCTGCCACCTCCCTATTCAACGACGCCCAGGCGATCCTGCGCAAGCTGATCGACGAGAAACTGATCCGCGCCAAG GCGATCTTCGGCTTCTGGCCGGCCAACCAGGTCGACCATGACGACATCGAGCTGTATGACGAGCAGGGCCAGCCGATCAGCCGGTTGTTCCACCTGCGCC AGCAGACGGTCAAGACCGACGGCAAACCCAACTTCTGCCTGGCCGACTTCGTGGCGCCCAAGGACAGCGGCGTGACCGATTATGTCGGCGGCTTCATCAC CACCGCCGGGATCGGCGCCGAAGAGGTGGCCAAGGCCTACCAGGAGGCGGGTGACGACTACAACTCAATCATGGTCAAGGCGCTGGCCGACCGCCTGGCC GAGGCCTGCGCCGAGTGGTTGCACCAGCAGGTGCGCCGTGAATACTGGGGTTACGACCCGGAGGAGCAGCTGAGCAACGATGAGCTGATCAAGGAAAAGT ACAAGGGTATCCGCCCTGCCCCCGGCTACCCGGCCTGCCCGGACCACACCGAGAAGGGCACCCTGTTCGACTTGCTCGACCCCGAGGCCAACTCCGGCGT GACGCTCACCGAGCACTACGCCATGTTCCCCACCGCAGCGGTCAGCGGCTGGTACTTCGCCCATCCCAAGGCGCAGTACTTTGCCGTCGGCAAGATCGAC AAGGACCAGGTGGAAAGCTACAGCAAGCGCAAAGGCCAGGATATCGAGACCACGGAGCGCTGGTTGATGCCGAACCTGGGTTACGACATCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGACCGGCCGGTAGCTGCATGGATAACGCAGTTGCCGGCCTCCCCTTTCCCCCTGCCACTTCGGCTGCAATGACCCTATTCGAAACTATCGCTGCGTTG CTCGGCATCCTGTCGGTCTGGCTGACGGTGCGGCAGAACCCCCTGTGCTGGCCCGTCGGGCTCGGCATGGTGTCGATGTACGCCTGGTTCTTCCAGTCCA CCGGACTCTATTCCCAGGTGTTGCTGCATCTCGTCTACGCGGCGGTGCAACTCTACGGATGGTGGCGCTGGACGCGCGGCGGCGACCAGCAGCCGCTGCG CGTGACATCGGTCTCCCGGGGCGAGCTATTGGTGAGTGGTGGCATTGCCTGCCTGATCAGCGTGGCGCTGGGCGCAGCCATGGCCGGCTTTACCGACGCG GTTTATCCGCGGCTGGACGCAACCCTGGTGGCCTTCAGCTTGCTGGCGCAACTCTGGATGGCGCTCAAGCGCCTACAGTGCTGGCCGCTGTGGCTGGTAT
|
|
| Amino Acid Sequence |
>methionine synthase
MSDLTTRLTALNDALRQRILILDGGMGTMIQSYRLEEADFRGERFADWPRDLKGNNDLLVLTRPDAIAAIEKAYLDAGADIIETNTFNSTRVSQSDYGME ELAYELNLEGARLARRVCDEKTAETPDRPRFVAGVLGPTSRTCSLSPDVNNPGYRNITFDALVENYSEATRGLIDGGADLILIETIFDTLNAKAAIFAVQ GVFEELGVELPIMISGTITDASGRTLSGQTTEAFWNSVRHAKPISVGLNCALGPKELRPYLEELSGKADTYVSAHPNAGLPNAFGEYDESPEDMAEIVGE FAASGFLNIVGGCCGTTPAHIEAIANAVSSYPPRQIPDIPKACRLSGLEPFTIDRSSLFVNVGERTNITGSAKFARLIREDNYTEALEVALQQVEAGAQV IDINMDEGMLDSKKAMVTFLNLIAGEPDISRVPIMIDSSKWDIIEAGLKCIQGKGIVNSISMKEGVEEFKKHARLCKRYGAAVVVMAFDEQGQADTAARK KEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFIEACAFIRDHLPHALTSGGVSNVSFSFRGNNPVREAIHSVFLYHAIKAGLTMGIV NAGQLEIYDAIPADLRNKVEDVILNRHPGATEALLNIAEDYRGDGSVKEVENEEWRSLPVDKRLEHALVKGITAFIVEDTEEARQQANRPIEVIEGPLMS GMNVVGDLFGSGKMFLPQVVKSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVAVVLGCNGYDIVDLGVMVPADKILKTAIEEKC DIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAVKIDPHYKNDAVVYVTDASRAVGVATTLLSKEMKPEYTGKIREEYAVIRERTANR ASRTERLSYAKALAAGPQFDWSEHSPTKPSFLGRKVLEDIDLRVLEQYIDWTPFFISWNLAGKYPRILEDEVVGEAATSLFNDAQAILRKLIDEKLIRAK AIFGFWPANQVDHDDIELYDEQGQPISRLFHLRQQTVKTDGKPNFCLADFVAPKDSGVTDYVGGFITTAGIGAEEVAKAYQEAGDDYNSIMVKALADRLA EACAEWLHQQVRREYWGYDPEEQLSNDELIKEKYKGIRPAPGYPACPDHTEKGTLFDLLDPEANSGVTLTEHYAMFPTAAVSGWYFAHPKAQYFAVGKID KDQVESYSKRKGQDIETTERWLMPNLGYDI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|