Pseudomonas sp. 12M76_air, VG99_RS13175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 12M76_air. [Details] | |
| DNA Sequence Upstream of Gene |
CATGCACCTGCTCGACGACGCGGGTCTTGAAGGGCGTCGGGTCGGTGGCTTCGCCGCTGAGGTTGTCCAGACTGACGCGGAACGGATGGCCCGCCGCGGC GCAGAACAGCCATTCCAGCGCCTGGGGTTTGACCTCGACCTGCTCGAAGGCATGTTGCTGATCGGCGCTGCGGCCATCCGGTGCATACCAGTAGCCGAAG TCCACCTGCTGCCGCCGCGCCGCCCCGGCCACGCACCAATGGGCGATCTCGTGCAGTGCACTGCGGTAATAATCCTGGGTGAAGATGATGCGGTGCATGG GGTCGTCGGCGTCGGCCGGCAGGTAGATCGGCTCGGCCCCACCGCCCACCAGGCGGGTGTTGAAATCGGCGGCAAAACAGGCCGCAAACAGGCGGATCAG GTCCTGGCAATCGTGGGTCATGGATGATGGACAATATTCGGCAAGTTGATAGGATGGTCTGCTTTTTTCCAATGCCGCTTCACCAAGGCGTGAACCCCAA
|
|
| DNA Sequence for Gene |
>VG99_RS13175
ATGACTCGAAACACCCCATCCCGCTGGCGCCGCAGTGTAACAGAATTGCGCGCGCTGATCTGGCTTGCCCTGCCCATTGTCGCGGCGCAGATGTCGCATA CCCTGCTCGGTTTTGTCGACACGGCCATGGCCGGGCGGGTGAGCGCTGTCGACCTGGCCGCGGTGGCGCTGGGCAACTCGTTCTGGGTGCCGACCTTCCT GTTTCTGACCGGTGTGTTGATGATCATCACCTCGAAGGTGGCCGCGAGCAACGGTGCCGGTCGCCTGGGGGAAACCGGGCCCCTGGTGCGCCAGGCGGTC TGGCTGGGGTTGTGGATCGGGGTACTCTGCGCGGTGGCGCTGTTCTCTGTCGAGCCGCTGCTGCATTGGGCAGGGGTGCAGGAGGAGCTGATTCCCAAGT CGGTGAACTATATCAAGGCCGTGGCGCTGGGCTTTCCGGCGGTGGGTATGTACCAGGCGCTGCGCGGACTGAGCGATGGGCTGTCGCGTACCAAGCCGAC CATGATCATCGGCTTTCTCGGCCTGGTGCTGAACGTGCCGGCCAACTATGTGCTGGTCTATGGCAAGTTTGGTCTGCCGGCACTGGGTGGCGTAGGCTGC GGCGTGGCTACCACCCTGGTGATGTGGTTCATGCTGGGCTGCATGCTGGTCTATCTGAAGCGCTCGGCCCTGTACGATGCCTGCAAGTTGTTCGAGCGGT TCGAGTGGCCCAAGTGGCCGGTGCAGCGGCACCTGCTGGGGCTGGGCTTGCCGATTGGTATCTCGCTGTTCTCCGAAACCAGCATGTTTGCGCTGATCGC CCTGCTGATCGGCAGCCTGGGCGCGGTGGTGGTGGCCAGTCACCAGATTGCACTGAACCTGACGTCCATCGTCTTCATGGTGCCCTTCAGCCTGGGGCTG GCGATTACCGTGCGGGTGGGCCATAGCCTGGGCATGGACGGCGCCCGCGCTGGGCTGTTCGCGGCCAAGGTGGGGATTGCCGTGGCGCTGGGCTTTGCCT TCCTGGCGGCGACCAGCTTCTACCTCGCCGCCGAGCTGCTGCCGCGGCTGTATACCAACAACCCCGAAGTGCTTTCCCTGGCGACCGCCCTGCTGTTCTA CGCAGCGCTGTACCAGTTCTCCGACTCCGTCCAGGTGGCCTGTGCGGGGGCGCTACGCGGGTACCAGGACACGCGCATTCCCATGGTGCTGACCATGGTC GCCTACTGGCTGATCGGCCTGCCCAGCGGCTACATCCTCGGTCTCACCGACCTGGCCGGCCCCGCCCAAGGCCCGGCCGGGTTCTGGAAGGGGCTGATCA TCGGCTTGAGTGCAGCGGCGTTGTTCCTGTCGGTGCGGCTGGCGATTATTGGCGGGCGGCGGAAGAAGCGGTTTCCATTGGAGCGGAGTCATTTGGTGGG GTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGGAGGGCTCCGTGCCGGCTGCTCCGTGCTGGCTGATAGCAATCGCCGCGAGGGCGCGCCTCCTACAGGTCGTGCCATCAGCAAGTTTTTCTGTAGGAG GGGCGACCTCGCCGCGATTGGCGCCCACCGGGCGCCCCGGTTTGGTATGTGACTGGTACTTCTGCGATCACCCCTCGCCCTTGCGTATCACATACCAGAA CTCGCCATCCCCCTCCCCCTGCTCCACCAGCTCGTGGCCAAGAAAACTGCAGAACCGCGGTATATCCCGCTGCGTTGAGGGGTCGGTGGCGAGCACCTGG AGGCATTCGCCGGCGGCGATGTCGCGCACCGCGTTATGCAGCAGCATTACCGGCTCGGGGCACATCAGGCCGCGGGTGTCGAGTTGGGTAGCAAATTCGT TGGGCATGGCAGACAGCTCTGAAACGTAAGGCTGAATTATCCGCAAAAGGCCAGGCACTTGCCAGTCGGCGCGTCCCGGTCAACACTGTGGTTACCATCC
|
|
| Amino Acid Sequence |
>multidrug transporter
MTRNTPSRWRRSVTELRALIWLALPIVAAQMSHTLLGFVDTAMAGRVSAVDLAAVALGNSFWVPTFLFLTGVLMIITSKVAASNGAGRLGETGPLVRQAV WLGLWIGVLCAVALFSVEPLLHWAGVQEELIPKSVNYIKAVALGFPAVGMYQALRGLSDGLSRTKPTMIIGFLGLVLNVPANYVLVYGKFGLPALGGVGC GVATTLVMWFMLGCMLVYLKRSALYDACKLFERFEWPKWPVQRHLLGLGLPIGISLFSETSMFALIALLIGSLGAVVVASHQIALNLTSIVFMVPFSLGL AITVRVGHSLGMDGARAGLFAAKVGIAVALGFAFLAATSFYLAAELLPRLYTNNPEVLSLATALLFYAALYQFSDSVQVACAGALRGYQDTRIPMVLTMV AYWLIGLPSGYILGLTDLAGPAQGPAGFWKGLIIGLSAAALFLSVRLAIIGGRRKKRFPLERSHLVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|