Pseudomonas sp. 12M76_air, VG99_RS02180

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000049 tRNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48163
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00749
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00749
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004818 glutamate-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00464
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0043039 tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00749
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00464
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006424 glutamyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00464
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00808
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain 3 319 1.1E-113
SUPERFAMILY SSF48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding superfamily 313 471 1.27E-36
Hamap MF_00022 Glutamate--tRNA ligase [gltX]. IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial 2 470 30.782513
CDD cd00808 GluRS_core IPR033910 Glutamyl-tRNA synthetase 2 326 0.0
Pfam PF19269 Anticodon binding domain IPR045462 Aminoacyl-tRNA synthetase, class I, anticodon-binding 333 470 3.4E-34
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 20 31 6.0E-23
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 35 48 6.0E-23
SUPERFAMILY SSF52374 Nucleotidylyl transferase - - 3 307 1.29E-114
NCBIfam TIGR00464 JCVI: glutamate--tRNA ligase IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial 2 467 0.0
Gene3D G3DSA:1.10.10.350 - IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 370 488 1.4E-32
PANTHER PTHR43311 GLUTAMATE--TRNA LIGASE - - 2 472 0.0
FunFam G3DSA:1.10.10.350:FF:000007 Glutamate--tRNA ligase - - 370 474 5.5E-33
FunFam G3DSA:3.40.50.620:FF:000045 Glutamate--tRNA ligase, mitochondrial - - 1 328 0.0
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 208 216 6.0E-23
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 192 202 6.0E-23
Gene3D G3DSA:3.40.50.620 HUPs IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 1 328 0.0
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 6 18 6.0E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.