Pseudomonas sp. 12M76_air, VG99_RS01700
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 12M76_air. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGATCTGCTTAAGTGCAGTCGTGGCGAGTTGTTCGGCCCCGGTAACGCACAGTTGCCAGCCCCCAACATGCTGATGATCGACCGCATCACCCACATCA GCGACACGGGCGGCCGCTTCGGCAAGGGCGAAATCGTTGCCGAGCTGGATATCCATCCCGACCTGTGGTTTTTCGCCTGCCATTTCGAAGGCGATCCGGT GATGCCGGGCTGCCTGGGCCTCGACGCCATGTGGCAGCTGGTTGGCTTCCACCTGGGCTGGCTGGGCTATGAAGGCCGCGGCCGCGCCCTGGGTTCGGGC GAAGTGAAGTTTTTCGGTCAGGTTCTGCCAACCGCGAAAAAAGTCACCTATACCATACATATCAAACGCACCATCAACCGCGCCCTGACCTTGGGCATTG CCGATGGCAGCATGGCGGTCGATGGCCGCGAGATCTACACCGCGGAAGGTCTGCGGGTGGGCCTGTTCACTTCTACTGATAGCTTCTGAGGATCACCACT
|
|
| DNA Sequence for Gene |
>VG99_RS01700
ATGCGTCGTGTCGTGATTACCGGTATGGGCATTGTTTCCTGCCTCGGCCAGGATCTGGAAAGCGTGGCTGCCAGCCTGAAAGAAGGCAAGTCGGGCATTA CCTACAACCCTGAATACGCCGAAATGGGTCTGCGCAGCCATGTTTCGGGCAGCGTGAAAATCGACCTGGAGGCTGCCATCGACCGCAAGGTCAAGCGCTT CATGGGCGATGCCGCCGCCTTTGCCTACCTGTCCATGCAACAGGCAATTGCCGACGCCGGCCTGACTGAAGAGCAGATCAGCAACCCGCGCACCGGCCTG ATTGCCGGTAGCGGTGGCGCCTCCACCCTCAACCAGATGGAGTCGGTCGACATCCTGCGGGAAAAGGGCGTGAAGAAGATCGGGCCGTACCGCGTGCCGC GCACCATGGGCAGCACCGTTTCCGCCTGCCTGGCGACCCCCTTCAAGATTAAGGGCATCAACTATTCGATCTCCTCCGCCTGCGCCACCAGTGCCCATTG CATCGGCAGCGCCATGGAGCAGATCCAGTTGGGCAAGCAGGATGTGGTGTTTGCTGGCGGCGGCGAAGAGGAGCACTGGAGCCAGTCCATGTTGTTCGAC GCCATGGGCGCGTTGTCCACCCAGTACAACGACACCCCGGAAAAGGCTTCCCGTGCCTACGACGCCAAGCGTGACGGTTTCGTCATTGCCGGCGGTGGCG GCATGGTGGTGGTCGAGGAGCTGGAGCACGCCCTGGCCCGCGGTGCGAAGATCTACGCCGAAGTGGTCGGCTATGGCGCCACCTCCGACGGCTACGACAT GGTCGCCCCCAGCGGTGAAGGCGCGGTACGCTGCATGCAGCAAGCCATGGCGACCGTCGAGGGCACCATCGACTACCTGAACACCCACGGCACCTCCACC CCGGTGGGCGACGTGGCCGAGCTCAAGGCCATCCGTGAAGTGTTCGGCGACAAGGCACCGAAGATCAGCTCCACCAAGAGCCTGTCGGGCCACTCGCTGG GCGCCGCGGGTGTCCAGGAAGCCATCTACTGTCTGCTGATGATGCGCGACAACTTCCTCGCCGCCTCGGCCAACATCGAAGAGCTGGACGAGAACGCTGC TGATCTGCCGATCCTGCGTGAGCGCCTGGACCAGGCCGTTGACCTGATCATGTCCAACAGCTTCGGCTTCGGTGGCACCAACGCCACCCTGATCCTCAAG CGCTGGAACGGCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GACTGATGGCGGGCAGAGCCCTCTGCCCGCCTTCTTTCTTTCCCTTCTTCCGTTACCGCAGCTGCAGAGCAGCCTGCTGCGCGCGCTCCACCCGGCGCGC CAACAGTGCCATGGTAGCGGCGCCTATTCCGCACAGAGTGATCATACCGGTCATCGGTAACGCCGTGCCGTTGTGCAGCGTGCCCACCAGTGCCGATACC ACCCCAGCGATGGCGAACTGCAGTGTCCCCATCAGCGCCGAGGCGACCCCGGCCTGGTGTCCGTGGCCCGCCAAAGCGCAGGCCGAGGAGTTGGGCAACA CCAGCGCCAGCAAAGCCATGCAGCAGAACAGCGGCACCAGCAGCGGCCACAGCGAGGGCGGTTCGAGCAGCGCCACCGCGGACAGTGCAATGGTGCTGCC CATGAACAGCAAAGTGGTGACTTTCAATAACTGGAGGGGCGTGCGCTTGCGCAGCAGCCGGCTGTTGAACTGCGCCGCCAGTACAAAGCCCGCCGAATTC
|
|
| Amino Acid Sequence |
>3-oxoacyl-ACP synthase
MRRVVITGMGIVSCLGQDLESVAASLKEGKSGITYNPEYAEMGLRSHVSGSVKIDLEAAIDRKVKRFMGDAAAFAYLSMQQAIADAGLTEEQISNPRTGL IAGSGGASTLNQMESVDILREKGVKKIGPYRVPRTMGSTVSACLATPFKIKGINYSISSACATSAHCIGSAMEQIQLGKQDVVFAGGGEEEHWSQSMLFD AMGALSTQYNDTPEKASRAYDAKRDGFVIAGGGGMVVVEELEHALARGAKIYAEVVGYGATSDGYDMVAPSGEGAVRCMQQAMATVEGTIDYLNTHGTST PVGDVAELKAIREVFGDKAPKISSTKSLSGHSLGAAGVQEAIYCLLMMRDNFLAASANIEELDENAADLPILRERLDQAVDLIMSNSFGFGGTNATLILK RWNGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|