Pseudomonas sp. 11/12A, GQ39_RS29555

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 11/12A GQ39DRAFT_scf7180000000022_quiver_dupTrim_8682.1_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCAAACTGGCAGTATTCGATGTCGATGGCGTCCTGACCGACGGGCGCCTGTACTTTCTCGAAGACGGCAGCGAATTCAAGACCTTCAATACCCTCGACG GCCAGGGCATCAAGATGCTGATGGCGGCCGGCGTCCAGACCGCGATCATCAGCGGCCGCAAAACCCCGGTGGTTGAGCGACGGGCGAAAAACCTTGGCAT CCCGCATCTGTACCAGGGGCGCGAAGACAAACTGGTGGTGCTCGACGAGCTTCTCGGCCAACTCAACCTAAGCTATGAGCAGGTCGCTTATCTAGGCGAC GACCTGCCGGACCTGCCGGTCATTCGCCGCGTCGGCCTGGGCATGGCGGTGGCCAATGCCGCAAGTTTTGTGCGTGAACACGCTCACGGAGTAACCCAGG CCCGCGGTGGCGAGGGTGCCGCCCGCGAATTCTGCGAATTGATCCTGCGCGCCCAGGGCCGTCTCGATGCGGCCAACGCCGCGTACCTGTGAGCCAAACC
DNA Sequence for Gene
>GQ39_RS29555
ATGCTGAACAAAAAAATTCGCAACATTCTGGTGTTCGGTTGCATTGCGGCGATTTTCGCCGCGGTCGGCTATTGGAACATCAGCCCGGAACGCTTCCTCG ACAAACCGATCGCGCATGTCGACGAAAGCGAAATCGACTATTACGCTACCAACGCCCACAGCGTGCAGTTCCTGCCTGATGGCAGGCTTCAATACGAAAT GACTTCCGACAAAGTCGAGCACCTCAAAGCAAGCGAAGTCACGCTGCTGACCAACCCTGACCTGAACATGTTCCGCGGCACCGAGTTCCCGTGGCACGTC CAGAGCGAAAAAGGTGAGGTCAACCCGGACGGCACGCAGGTTGAATTGATCGATTCGGTACGCATCACGCGCTTTGATGAAAAAAACCGCAGAACCCTGA TCACCACCACCCGAATGACGGTGTTCCCGCAGCAGCAATATGCGCAGACCGAGCAACCCGTTAGAATCGACGGCGCTGGCGGCGTATCGACCGGTACCGG AATGAAAGCGTATTTGAAAGAAAGCAGGATACACCTGCTATCGAACGTAAGAGGACAGTATGAGGCTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCCTCCCTATTTTGCTCAGTCTGGGCGCAGCACTGGGAAGCGTGAGCGCCTGGGCTCTGCCGAACGATCAAGAGCAGCCTATCCGCATTCAAGCCGAC GACGCCCAACTGGACGACAAGAATGGCGTTGCCACCTACAAAGGTGACGTGATCATTACCCAGGGCTCGATGAAGGTCACCGGCAACACCGTGACCATCA CCCGCACGCCGACCGGCGATATCGACGTAGTGACCTCTGTAGGCAACCTGGCCTACTTCGAACAACTGCAAACCCAGGGCGACACCAAGCCTGTCCAGGG CTGGGGAGTGACCATCCAGTACCACGCCGCGCAAAACCGCGTCGTACTGATCGATCGCGCCAAAGTCATCGACAAGGACAACAACACCACCCAGGGCGAA AAAATCGTCTACGACACCGTCAAGAAGCTTGCGAGCGCTGGCCGAGCGACAGGTAACAAGGTCACCGAAGCGCGTCCGCGCATCGACATGGTGATCCAGC
Amino Acid Sequence
>lipopolysaccharide ABC transporter permease
MLNKKIRNILVFGCIAAIFAAVGYWNISPERFLDKPIAHVDESEIDYYATNAHSVQFLPDGRLQYEMTSDKVEHLKASEVTLLTNPDLNMFRGTEFPWHV QSEKGEVNPDGTQVELIDSVRITRFDEKNRRTLITTTRMTVFPQQQYAQTEQPVRIDGAGGVSTGTGMKAYLKESRIHLLSNVRGQYEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site