Pseudomonas sp. 11/12A, GQ39_RS20965 (obgE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 11/12A GQ39DRAFT_scf7180000000022_quiver_dupTrim_8682.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCAGGCTTAATTACAGCCTAATTCCTCACTAGGAGAATTGAACTCATGGCACACAAAAAAGCTGGTGGTAGTACCCGTAACGGTCGCGACTCAGAAGCCA AACGCCTTGGCGTGAAGATGTATGGCGGCCAGGCTATCAAAGCAGGCAACATCATCGTGCGTCAGCGCGGCACCCAATTCCACGCTGGCTACGGCGTTGG CATGGGTAAAGATCACACCCTCTTCGCTAAAGTCGAAGGCGTGATCAAGTTCGAAGTAAAAGGCGCCTTCGGTCGTCGTTATGTGAGCGTAGTCGCAGCT TAATTGCGCGATCGCTGGAAAAGCCCTGTCTCGCGACGGGGCTTTTTCGTTTGTGGGGTGAGTCTCTTGCAAAACTGTTTGTATGGGCTGTCGGCGCGCT GGATTGTGCGGTCGTTGATTGAGGTCGCTGCGCTCATTTTTGCAAGAGTCTTATGTCTTAGTGTTTTTCGGCTCGTCCGTATGGCGAGAGGCGTTGTGTT
|
|
| DNA Sequence for Gene |
>GQ39_RS20965
|obgE
ATGAAGTTTGTTGATGAAGTATCGATTCGAGTAAAGGCTGGCGACGGCGGTAACGGTTGCATGAGTTTCCGGCGCGAGAAATTCATCGAGAACGGTGGTC CGAACGGTGGTGATGGCGGTGATGGCGGCTCGGTCTACATGATCGCCGACGAAAACCTCAATACCCTGGTGGATTACCGTTACACCCGGCACTTCGATGC CGAGCGTGGCTCCAATGGTGGCAGCACCGACTGCACCGGCAAGAAGGGTGAGGATCTGGTTCTGCGCGTTCCGGTCGGCACCACCGTGATCGATTCCGCG ACTCAGGAAGTGATCGGTGACCTGACCAAGGCTGGCCAGAAGCTGCTGGTGGCCCATGGCGGCTGGCACGGTCTGGGTAACACGCGTTTCAAATCCAGTA CCAACCGTGCACCGCGCCAGACTACGCCGGGCAAGCCGGGCGAGCAGCGTGATCTCAAGCTGGAAATGAAAGTGCTGGCGGACGTGGGTCTGCTGGGCTT GCCGAACGCTGGCAAAAGTACCTTTATCCGTTCGGTATCGGCGGCCAAGCCGAAAGTTGCCGACTACCCGTTCACCACGCTGGTGCCAAACCTCGGCGTG GTCAGCGTCGATCGCTGGAAAAGCTTCGTGGTTGCGGACATTCCGGGCCTGATCGAAGGTGCTTCCGAAGGCGCGGGTCTGGGTATTCGCTTCCTCAAGC ACTTGTCGCGTACCCGTCTGCTGCTGCACCTCGTCGACATGGCGCCGCTGGATGACACCAGTGCTCCGGACGCCGCAGAAGTCATCGTTAACGAATTGAC CAAGTTCAGTCCGTCCCTGGCTGAGCGTGATCGTTGGTTGGTCCTGAACAAATGCGACCAGATTCTTGAAGAAGAGCATGATGCACGCGTCAAGGAAATC GTTGATCGCCTGGAGTGGACGGGTCCGGTCTATGTGATTTCGGCCATCGCCAAGCAGAACACCGAGCGCTTGTGCCACGACATCATGCGCTATCTGGAAG ATCGTGCCGATCGTCTGGCCAATGATCCCGCCTACCGGGAGGAGCTGGCAGAGCTCGATCAGCGCATTGAGGATGAGGCGCGTGCCCAGCTGCAAGCGCT GGACGATCAGCGTGCCCTGCGTCGCAGCGGCGTGAAGTCGGTCCACGACATCGGCGACGATGATTGGGATGAAGAAGACGTGGATGACGAAGACGGTCCG GAAATCATTTACGTGCGTGACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCGTTGCGATAAACTTAAGCGCCGCTCAATTGAGCGGCGTTTTGGTATCTGGAAATCGATCGTTGGTCACGAATAACCACGAATAACGTCACGGGCAGT GCTAGGTCGCGTTGCCCTCAAGCTAAGGTTGAAGATGATGCGGAGCAAGGTGACAGGTGCGCGGCGTTGGGTCGTGAAGATCGGCAGCGCTTTGCTGACG GCGGACGGCAAGGGCCTGGATCGCGCGGCAATGAGTGTCTGGGTTGAGCAGATGGTGGCTTTGCATGAGGCGGGCGTCGAGCTGGTGCTGGTGTCCTCCG GGGCGGTGGCGGCCGGCATGAGTCGTCTGGGCTGGACTGCGCGACCCAGTGCGATGCACGAGCTTCAGGCCGCCGCTGCAATCGGCCAGATGGGGCTGGT GCAGGCCTGGGAGTCGAGCTTTGCCGAGCACGGCCGGCACACGGCGCAGATTCTCCTGACTCACGACGACCTGTCCGACCGCAAGCGCTACCTGAATGCC
|
|
| Amino Acid Sequence |
>GTPase CgtA
MKFVDEVSIRVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSVYMIADENLNTLVDYRYTRHFDAERGSNGGSTDCTGKKGEDLVLRVPVGTTVIDSA TQEVIGDLTKAGQKLLVAHGGWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKLEMKVLADVGLLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPNLGV VSVDRWKSFVVADIPGLIEGASEGAGLGIRFLKHLSRTRLLLHLVDMAPLDDTSAPDAAEVIVNELTKFSPSLAERDRWLVLNKCDQILEEEHDARVKEI VDRLEWTGPVYVISAIAKQNTERLCHDIMRYLEDRADRLANDPAYREELAELDQRIEDEARAQLQALDDQRALRRSGVKSVHDIGDDDWDEEDVDDEDGP EIIYVRD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|