Pseudomonas sp. 11/12A, GQ39_RS18085

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 11/12A GQ39DRAFT_scf7180000000022_quiver_dupTrim_8682.1_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCAGCATTGCGGCCTACACGCCGATTCGCTCTTTCACTCACAATTTACGCACAGGCTTATCCACAGGTAGTACGTTGCAATCCCCCCCCAAAACGCATT ATCTTGTACCTCGGCGCCAAAAAAACCCTAGATGTAGGGTTTTGCGCAAAAGACCAAACACAAACCGGACACCAATTTCAAGCGCTTTTCTTGCCACCCT CCGGTTGAACCAAACGTATTTTCGACAGCCAAAACCGCGCGTGCGGATGGTTACTGTATTTCGGCCCATAAGGGTGAAAACGGTACGGGTGTTGCAGTCC CCAACTGTCACCTCAAAGGACCCCGGCCTCCCGCCCAAGGCGTGAGACCAAAGACTTCGGCATGGAAGCGGCGCCCAAATAGCCCCCTTCCTACTGTCCC GAAGTTGTTATGCCCGGCATTCGCCGGTTGTAGTGCTTCAGGACAGAACGGTGGGCACCGTGATGGTGCCCAAACAAACATAGAGAACGTGGAGACACCC
DNA Sequence for Gene
>GQ39_RS18085
ATGCAAACCGACACAACTCGCGAGAACCCGCAGGGCACCTTGCCTCAGGCCGCTGATTCGAATTCGGATCTGTCCGCCACCGCGCCGGGCCAGCTTCGCG TGATCAAGCGTAACGGCACTGTCGTTCCTTACACCGATGACAAAATCACCGTCGCCATCACCAAAGCGTTTCTCGCAGTTGAGGGCGGCACCGCTGCCGC TTCGTCGCGAATCCACGACACCGTTGCACGCCTGACCGAACAGGTCACCGCGACCTTCAAGCGTCGCATGCCATCGGGCGGCACCATCCACATCGAAGAA ATCCAGGACCAGGTCGAACTGGCCCTGATGCGCGCCGGCGAGCAGAAAGTTGCTCGCGACTACGTGATCTATCGTGATGCCCGTTCCAAGGAACGCGCCG TACGCGCCCCGGCCGAAGATGCGGTCAACGCTCATCCTTCGATCCGCATTACCCGTGCCGACGGCAGCCTGGCGCCGCTGGACATGGGCCGCCTGAACAC CATCGTCACCGAAGCCTGCGAAGGCCTGGAAGAAGTCGACGGCGACCTGATCCAGCGCGAAACCCTGAAAAACCTGTACGACGGCGTGGCCCTGACCGAC GTCAACACCGCTCTGGTGATGACTGCCCGTACGCTGGTCGAGCGTGAGCCAAACTACTCGTTCGTCACCGCGCGCCTGCTGATGGACACCCTCCGTGCCG AAGGCCTGGGCTTCCTCGGCGTCGCCGAAAGCGCCACCCACCACGAAATGGTCGACCTGTACGCCAAGGCCCTGCCTGCCTACATCGCCAAGGGTATCGA ATTCGAATTGCTGAACCCGGTTCTGGCCGACTTCGACCTGGAAAAACTGGGCAAGGCGATCAACCACGAGCGCGACCAACAGTTCACCTACCTGGGCCTG CAAACCCTGTACGACCGTTACTTCATCCACAAGGATGGCGTGCGGTTCGAGCTGCCGCAGATTTTCTTCATGCGCGTGGCCATGGGCCTGGCGATCGAAG AGAAGCAAAAGGAAGACCGTGCGATCGAGTTCTACAACCTGTTGTCGTCCTTCGACTACATGTCCTCGACCCCGACGCTGTTCAACGCCGGCACCCTGCG TCCGCAGCTGTCGAGCTGCTACCTGACCACCGTGCCGGATGACCTGTCGGGCATCTACCACGCGATCCACGACAACGCCATGCTGTCGAAATTCGCCGGC GGCCTGGGCAACGACTGGACGCCTGTTCGTGCACTGGGTTCGTACATCAAGGGCACCAACGGCAAATCCCAGGGCGTTGTACCGTTCCTGAAAGTCGTGA ACGACACTGCCGTCGCCGTTAACCAGGGTGGCAAGCGCAAGGGCGCTGTCTGTGCCTACCTGGAAACCTGGCACATGGACATCGAGGAGTTCATCGAACT GCGCAAGAACACCGGTGATGACCGTCGTCGTACCCACGACATGAACACCGCCAACTGGATTCCTGACCTGTTCATGAAGCGTGTCTTCGATGATGGCAAG TGGACCCTGTTCTCGCCGTCCGAAGTTCCAGACCTGCACGACCTGACTGGCAAGGCCTTCGAAGAGCGCTACGAGTACTACGAAGCCCTGACCGAGTACC CAGGCAAGGTCAAGCTGTTCAAGACCATCCAGGCCAAAGACCTGTGGCGCAAAATGCTGTCCATGCTGTTTGAAACCGGCCACCCATGGCTGACCTTCAA AGACCCGTGCAACCTGCGCAGCCCGCAGCAGCACGTCGGCGTGGTCCACAGCTCGAACCTGTGCACCGAGATCACCTTGAACACCAACAAGGACGAAATC GCCGTTTGCAACCTGGGCTCGATCAACCTGCCAAACCACATCGTCAACGGCAAGCTGGACACCACCAAGCTGCAACGCACCGTGAACACTGCCGTGCGCA TGCTCGATAACGTGATCGACATCAACTACTACTCGGTGCCGCAAGCGAAGAACTCCAACTTCAAGCACCGTCCGGTCGGCCTGGGCATCATGGGCTTCCA GGACGCGCTGTACCTGCAACACATCCCTTACGGTTCCGACGCGGCTGTCGAGTTCGCCGACAAGTCGATGGAAGCGGTCAGCTACTACGCGATCCAGGCT TCCTGCGACCTGGCTGACGAGCGCGGTGCCTACGAGACGTTCCAGGGCTCTCTGTGGTCCAAGGGCATCCTGCCGCTGGATTCGCAACAGATCCTGATCG AACAACGTGGCCAGAAGTACATCGACGTTGACCTGAACGAAACCCTGGACTGGGCACCTGTGCGCGCCCGTGTACAGAAAGGCATTCGTAACTCCAACAT CATGGCCATCGCACCGACCGCGACCATCGCCAACATCACTGGCGTTTCGCAGTCGATCGAGCCGACCTACCAGAACCTCTATGTGAAATCGAACCTGTCG GGCGAATTCACCGTGATCAACCCGTACCTGGTTCGCGATCTGAAAGCTCGCGGTCTGTGGGATTCGGTCATGATCAACGATCTGAAGTACTACGACGGTT CCGTGCAGCAAATCGAGCGCATCCCGCAAGAGCTCAAAGAGCTCTACGCGACCGCCTTCGAAGTGGACACCAAGTGGATCGTTGACGCGGCAAGCCGTCG TCAGAAGTGGATCGACCAGGCCCAGTCCCTGAACCTGTACATCGCCGGCGCTTCGGGCAAGAAGCTGGACGTGACCTACCGCATGGCCTGGTACCGTGGT CTGAAAACCACTTACTACCTCCGTGCCCTGGCCGCGACCAGCACCGAGAAGTCGACCATCAACACCGGCAAGCTGAACGCTGTTTCCAGCGGCGGCAACC ACGGCGACGACTCGGTCCTGGCTGCGCCAGCAGGTCCGGCACCAGTGCCGAAGGCCTGCGCCATCGACGAGCCGGATTGCGAAGCTTGCCAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTGAGCTGGTCAGCGTCGCAAGGCGCTTTCCTGAAACCCCCGATGAGCCACTGGCTGATCGGGGGTTTTCTTTTGGCTCTAGCAGGCGAAAGCGTGCTC GCTATGCAGGTGAAAGCCACACGGTTATTCAGCCAGAACACGTGATCGTTAACGCCCGTCGCGAGCAAGCTCGCTCCTACCGGACCGACCAAAACTAAAA AGCCCCTCTTGCGAGGGGCTTTTTGTGCAGCGCTTTCAGCCAACCGGCATCAGGTCATCTGAATAATGGTCTGCATGATGGTGCTTTGGGTGGAGATGGT CTTGGCGTTCGCCTGGTAGTTGCTCTGCGCCTTGATCAGGTCGACCAGTTCGTTGGTCAGGTTAACGTTGGACTCTTCCAGGGAGTTGGAAACCACCGCG CCCAGGGTACCGGTTTTCGGTGCATCAACGCCGGCCACGCCCGAGGAGAAGGTTTCTTTCCAGCGGGTACCGCCAATTGGCTGCAAGCCTTGCTCGTTGG
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit alpha
MQTDTTRENPQGTLPQAADSNSDLSATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYRDARSKERAVRAPAEDAVNAHPSIRITRADGSLAPLDMGRLNTIVTEACEGLEEVDGDLIQRETLKNLYDGVALTD VNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVAESATHHEMVDLYAKALPAYIAKGIEFELLNPVLADFDLEKLGKAINHERDQQFTYLGL QTLYDRYFIHKDGVRFELPQIFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGK WTLFSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEI AVCNLGSINLPNHIVNGKLDTTKLQRTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAVEFADKSMEAVSYYAIQA SCDLADERGAYETFQGSLWSKGILPLDSQQILIEQRGQKYIDVDLNETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLS GEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRG LKTTYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAIDEPDCEACQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site