Strain | Pseudomonas sp. 11/12A GQ39DRAFT_scf7180000000022_quiver_dupTrim_8682.1_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCCTGCGTACCGGCGACAAGGGCGAGCAAGACGCCGAAGGCAACCTGCGCCTGACCGGGCGCCTGAAGGAAATCTTCAAGACCAGCAAAGGCAAATACG TGGCCCCGGCCCCCATCGAAAATCGTCTGGCGGTGCATTCGCGCATTGAGCAGGTGTGTGTAGTCGGTGATGGCCTGATTGCGCCACTGGGGTTGTGCGT ACTGTCGGCGGTCGGGCAGCAGGATGCGGGCGGCGCGGCGCGCGCCGGCCTGCACTCAAGCCTGGAAAAGCTTTTGGATGAGGTCAATGGCGCCCTCGAC AAGCACGAACGCTTGCGGCGTCTGGTGGTGGTCAAGGATAGCTGGGCGGTAGAAAACGGCTTCCTCACGCCAACCTTGAAAATCAAGCGCAACGTGATCG AAGCAGCTTATGGCGCCCGTTTCGAGGAATGGAGCGAGCGTAGCGAGACAGTGCTGTGGCAGGATTGAGTCACGAACAAAACCAACAAAGGAAGTCAGCG
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DNA Sequence for Gene |
>GQ39_RS17880
ATGAGTTTGTGGCGCACCACTCCCAACATCGAGCAATTGAATGCCATCCAGAAAAACACCATTGGCGAAGTGCTGGATATCCGCTTCGAAGCCTTTGATG ACGAGTCCCTGACGGCGAGCATGGTCATCGATCATCGCACCCATCAGCCTTACGGTCTTTTGCACGGCGGCGCTTCTGTGGTGCTGGCCGAGACGGTCGG CTCCATGGCCAGTTACCTGTGTATCGATGCCAGCAAGTTTTACTGCGTGGGCCTGGAAATCAATGCCAACCATCTGCGTGGCCTGCGCAGCGGGCGGGTG ACAGCGGTGGCCAAGGCGATTCACATCGGTCGCACGACCCATGTCTGGGACATTCGGCTGACCAGCGATGAGGGCAAGGCCAGTTGTGTGTCGCGGTTGA CCATGGCAGTGGTGCCGCTGGGGCAAAATCCGCCGGCGCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCAAGTATTGTGGCGAGGGTGCTTGCTCCCGTTGGGTCGCGAAGCGGCCCCAGTCACCTTGACCCGGGACATCTGCTCATGACGGCTGCTATGCATCCG TACGCGAGCAAGCCACAGGTTCATGGGTTTGACCGGACTGTCATCATTCCTGTCAGTTACGGTCATTGCTGCATGGCGCGGACTTACGGACAATCGAGCT CTGTTTTCGTTGATGGATCGTCGGTATGTCGCAGCAGATATTTTTCGCCCACGCCAACGGGTTTCCCTCGGGAACTTATGGCAAGTTGTTCGCGGCGCTG GCGCCCGAGTATCAGGTGACGCATCTGGAGCAGCACGCCCATGACCCGCGGTTCCCGGCGGATGACAATTGGTACAACCTGGTGGACGAATTGATCCATC ATCTGGAGCAGCAGCCCGAACCGGTCTGGGGCGTCGGTCACTCCTTTGGCGGCGTACTGCATCAGCACGCGGCGTTGCGCTGCCCTCATCTCTATCGTGG
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Amino Acid Sequence |
>esterase
MSLWRTTPNIEQLNAIQKNTIGEVLDIRFEAFDDESLTASMVIDHRTHQPYGLLHGGASVVLAETVGSMASYLCIDASKFYCVGLEINANHLRGLRSGRV TAVAKAIHIGRTTHVWDIRLTSDEGKASCVSRLTMAVVPLGQNPPAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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