Pseudomonas sp. 11/12A, GQ39_RS17270
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 11/12A GQ39DRAFT_scf7180000000022_quiver_dupTrim_8682.1_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGTTTGCCCGCGGCGAGCTGCCCTTGACCGATCGTGTAACCCCCAGGCAACTGATGCAGTCGCTGCAAGCGGCCGCATTGACCCATGTGCAGGACCTGC CGATCCGCTGGCAGTGTGACAGCCATGTCGGCGAGTTGCTGTGCAGTCGCGACACCCTGGTCGGGGCCATTCTCAATCTCATCGAAAACGCCATTCAGGC CAGCGGCGGTCATGTCCGTCTGAAGGTTCATCTGTACACCCGCGAAAACACCCTGCGCCTGTGTGTCAGCGATAGCGGCAGCGGTATCGACGACGCCGTG CTGGCGCGTTTGGGTGAGCCGTTTTTCACCACGAAATCCACCGGGACCGGCCTGGGCCTGACGGTGGTCAAGGCGGTTGCGCGTGCCCATCAGGGCGAGT TGCAGTTGCGCTCGCGGTTGGGGCGCGGCACTTGTGCGCAGGTGAGCCTGCCGCTTTTTTTTGGTGAAAAAACCAGCGCTCAGAGAGCCGAGTGAAGGTC
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| DNA Sequence for Gene |
>GQ39_RS17270
ATGGGTATCAAGGTTCTACTGGTCGAGGATGACCGCGCACTACGCGAAGCACTGGCTGACACGCTGTTGCTCGCCGGACACGATTACAAAGCCGTCGGTT CGGCGGAAGAAGCATTGGCCACCGTGGGGGGCGAGGCGTTCAGTCTGGTGATCAGCGACGTCAATATGCCGGGCATGGATGGTCATCAATTGCTCGGCTT GCTGCGCGCGCGTCAGCCGCAACTGCCGGTGTTGCTGATGACCGCGCACGGTGCCGTGGAGCGGGCAGTCGATGCGATGCGCCAGGGCGCTGCGGATTAT CTGGTCAAGCCGTTCGAGCCCAAGGCCTTGCTCGATCTGGTGGCCCGTCATGCCTTGGGCAGTCTGGGCGCGCCGGAGAGCGAAGGGCCTGTCGCGTTCG AACCGGCCAGTGCGCAGTTGCTCGAACTGGCTGCGCGGGTCGCGCGCAGCGACTCCACGGTGCTGATTTCCGGCGAATCGGGGACCGGTAAAGAAGTGCT GGCGCGCTACATTCATCAGCATTCTCATCGCGCCAGCCAGCCGTTCATTGCGATCAACTGTGCGGCGATCCCCGACAACATGCTGGAGGCCACGCTTTTC GGTCACGAAAAAGGTTCGTTCACCGGTGCCATCGCGGCGCAGGCCGGCAAGTTCGAGCAGGCCGATGGCGGGACTATCCTGCTCGACGAAATTTCCGAGA TGCCCCTGGGGCTTCAGGCGAAATTGCTGCGTGTGCTGCAAGAGCGCGAGGTTGAGCGAGTCGGTGCGCGCAAGCCGATCACCCTGGACATTCGTGTCGT CGCCACCACTAACCGTGATCTGGCCGGGGAAGTGGCGGCGGGGCGTTTCCGTGAAGACCTTTATTATCGCCTGTCGGTGTTTCCGCTGGCCTGGCGTCCG TTGCGTGAGCGCCCCGCCGACATCCTGCCGCTGGCCGAGCGTCTTCTGGCCAAGCACGTCAATAAAATGAAGCATGCCGTGGCGCGACTGTCCCCCGAGG CGCAGGCTTGCCTGGTCGGTTATCCGTGGCCGGGTAATGTGCGTGAGCTGGATAACGCGATCCAGCGTGCGCTGATCCTGCAGCAAGGTGGCTTGATTCA GCCTCAGGATTTCTGTCTGAGCGGCCCGGTCGCCTGCGCGCCCCTGCCGGCCTTGGCGTCGGTGCCCGTGCGCGCAGTGGAGGTCGAAGCCGAAACGGGC GGAGCGCTGGGGGATGACCTGCGCCGCCGTGAGTTCCAGATGATTATCGACACGTTGCGTACCGAGCGTGGCAGGCGCAAGGAGGCTGCTGAGCGGCTGG GCATCAGCCCGCGCACCTTGCGTTACAAATTGGCGCAAATGCGCGATGCGGGAATGGACGTGGAAGCCTGTTTGTTCGCCACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCAGTTCCTGTAGGAGCGAGCCTGCTCGCGATGGTCGTTAACGATTACTCGGGGTTTCAGGATAAACGCGGTGCTCTTGAGATCATCGCGAGCAGGCTC GCTCCTACAGGACGAGGTTCGGATTAGGGCCGGGGTTGGCTTTTGTTGGGCGCAGCCGCGGAGCTGGCACCCTTGTTGCTAACACCTCACTACCCGCCGA GTGAGTGTCAAAAAAATTGCGGGACGCCAACGACGTAGTTCGTCAAAGAGAGAAGTCATGAGCCAAGGTATTGAATTCAACCGATTGATGCTGGATATGC GCGCCATGCAAATGGATGCCATGTCTGCGCCGAAGTCGTCTGCCGCAGTCCCTGAACTGAGTGGCACCAGCTTTTCCGACATGCTCGGTCAGGCTGTCAA TAAAGTGAACGACACCCAGCAGGCTTCCTCTCAATTGGCCAACGCCTTCGAGATTGGCAAGAGCGGCGTCGACCTCACCGACGTGATGATTTCCTCGCAA
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| Amino Acid Sequence |
>Fis family transcriptional regulator
MGIKVLLVEDDRALREALADTLLLAGHDYKAVGSAEEALATVGGEAFSLVISDVNMPGMDGHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADY LVKPFEPKALLDLVARHALGSLGAPESEGPVAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQHSHRASQPFIAINCAAIPDNMLEATLF GHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQAKLLRVLQEREVERVGARKPITLDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRP LRERPADILPLAERLLAKHVNKMKHAVARLSPEAQACLVGYPWPGNVRELDNAIQRALILQQGGLIQPQDFCLSGPVACAPLPALASVPVRAVEVEAETG GALGDDLRRREFQMIIDTLRTERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEACLFAT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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