Strain | Pseudomonas sp. 11/12A GQ39DRAFT_scf7180000000022_quiver_dupTrim_8682.1_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCGAGAAGCGCACACGGGCGCCTTTGCTGCTGGGGTGCAGGCCTTCGCCCGCGACGAGGATGCCGGCCTTGGCCAGTTCTTCGTTGTAATTGCCCATGG CGGTCAGCAATTCGTTGCTGGGCATGACGCCGGCTTCGGAGTCCTGACTGGCTTTGATGATGATCATGAATCGCATGGTTTCGATCTCCGCTGAATTTGA GTGATTCAATTTATAGTCGTATGGCGGAGCACCCAATCGACACTGTTGCAAAAAAATTCGCCAACGGGGTCGATGCGTGTCTTTCGTGATGAACGCCGGG TGGCGGCTGGGGAGGGCGATTGCTTATTGGGGCGGCAAGCCGGGCTCCCACAGGGTTTTGTGGTGATTGTGCAAGCGCCGGATTTCAGATTGCTCGACGA CTGTTCACAAATTGTATCCAGAGTAGGTCGTCCGACAATTTCGTGGTTAACTTCGACCTCTTCAAATTTCTCTACAACAACGTTCAGAAGGACTCCGTTC
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DNA Sequence for Gene |
>GQ39_RS06865
|tpx
ATGGCTCAAGTCACTCTTAAAGGCAACCCGGTTCAAGTCAACGGCCAACTGCCTCAAGCCGGTTCCAAGGCGCCAGCCTTTTCCCTGGTTGCCGGCAATT TGTCCGACGTCTCCCTGAAGGACTTCGCCGGCAAGCGCAAAGTGCTGAACATCTTCCCAAGCGTCGACACCCCGACTTGCGCCACGTCCGTGCGCAAGTT CAACGCCCAGGCCAATGACGTCGCCAACACCGTGGTGCTGTGCATCTCCGCTGACCTGCCGTTCGCCCAGGCCCGTTTCTGCGGCGCCGAAGGCCTGGAA AACGTACAGAACCTGTCGACCCTGCGCGGTGCCGAGTTCATCGAGAATTATGGCGTTGCTATCGCTGACGGCCCGCTCAAAGGCCTGACTGCCCGCGCCG TGGTGGTGCTGGACGAGAACGACAACGTCCTGCACAGCGAGCTGGTCAAGGAAATCGCTGAAGAACCGAACTACGAAGCGGCACTTGCTGTACTGAAATA A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCTGCGTTTACATTTGTTAACGGCCTGGCCCTCCCCAGGCCGTTTTCATTTGTGTTTCAGTGTCTTGGATAAATCTCCTGATACGTAAGCCGAAAGTAA ATTGCCGGTAAAGGCGCTTTGCTTAAGACCCGCCAGTGCTTATCGTTCAGCCTCATGTAAAAGAAGCCCACGCGCCTAATGGTTGATCACTCAATGCAAT CCTCCGCCCCCCGTAGTCCCCGTCGCTGGCTGTTTGGCCTGCTTGTCCTGTTGGTCATCGCTGGTCTGTGCTGGAAATTCTGGCCCGGCAGCGCTGTGCC GAAAGACGCTGCGGGTCAAAAAGCCGTTGCCGGACACACGGGCAAGTCAGGCGCGATGCGTCCAGGGTTCGGCGGTGCGACCGGGCCGGTTCCGGTGCGA GTGGCTCCTGCGGTCAAGGGCGACTTCCCGCTGTACTACAAGGCGCTGGGTACCGTCACGGCGCTGAATACCATCAACGTGCGCAGCCGCGTTGGCGGTG
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Amino Acid Sequence |
>peroxidase
MAQVTLKGNPVQVNGQLPQAGSKAPAFSLVAGNLSDVSLKDFAGKRKVLNIFPSVDTPTCATSVRKFNAQANDVANTVVLCISADLPFAQARFCGAEGLE NVQNLSTLRGAEFIENYGVAIADGPLKGLTARAVVVLDENDNVLHSELVKEIAEEPNYEAALAVLK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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