Pseudomonas sp. 11/12A, GQ39_RS04610

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00240
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0042953 lipoprotein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00240
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF89392 Prokaryotic lipoproteins and lipoprotein localization factors IPR029046 Lipoprotein localisation LolA/LolB/LppX 25 205 1.84E-49
Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria 9 206 30.097778
PANTHER PTHR35869 OUTER-MEMBRANE LIPOPROTEIN CARRIER PROTEIN IPR004564 Outer membrane lipoprotein carrier protein LolA-like 6 206 3.9E-49
Pfam PF03548 Outer membrane lipoprotein carrier protein LolA IPR004564 Outer membrane lipoprotein carrier protein LolA-like 34 196 1.8E-55
NCBIfam TIGR00547 JCVI: outer membrane lipoprotein chaperone LolA IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria 8 203 7.2E-26
CDD cd16325 LolA IPR004564 Outer membrane lipoprotein carrier protein LolA-like 25 188 3.69359E-44
Gene3D G3DSA:2.50.20.10 Lipoprotein localisation LolA/LolB/LppX - - 23 205 1.7E-56

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.