Strain | Pseudomonas sp. 10B238 scaffold14, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCGCAACCGGACCGATGCCGAGCGTAACCTCACCGCTGCGGGCCGAGTCGAAGTGGAGCGCGCCGCCGCGCATCTACAAGGGCAACCGCTGCAGGCCAT TCTGGCAAGTCCCTATCAGCGAGCCCAACAGACCGCTGAGATCGTCCGGCAGGCGCTCGGTTTTAGCGGATCGGTGGAAACCGTACCCTGGTTGACGCCG GAATCTGATCCGGCCGATGCGCTGCTTTATCTCGATCGTCGTAGCGAACAGCACGTGTTGCTGGTCACCCATCAGCCCTTTGTCGGTGTGTTCGGCGGGT GGCTGGTCAGTGGTCACCGCGACGCGCCCATTCCGATGGCAACCGCTAGCCTGGCTGAGTTGGAAGGGGAGCACGTTGCGGCGGGGTTGATGCGCCTGGT TGCGCTGCGGCATCCAGTCTAATTGCACTAGCTACTATCGATGCTGCGCTTGCAACTGCAAGTGACTTGCTGCAGACAAAACAAAAAACAGGAGCGATAC
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DNA Sequence for Gene |
>RT21_RS19420
GTGAGCATTTGGCAACGACCACCGAGCCTCGAACAACTCAACGCCAACCGTCAGAACACCATTGTCGAGCTGCTCGATATTCGTTTCGAAGCAGTCGAAG AGGATTGCCTAACGGCCAGCATGGTCGTGGACTCCCGTACTCACCAGCCCTATGGGTTGCTGCACGGCGGTGCTTCGGTAGTGCTCGCTGAGACCGTTGG GTCCATGGCCAGCTACCAATGCATCGACCCGAGCCGATTTTATTGTGTCGGCCTCGAAGTGAACGCCAACCATATCCGCGCGGTACGCAGCGGTCGTGTC ACCGCGGTCTGTCGTCCGGTTCATCTGGGACGGTCCAGCCACGTCTGGGACATACGGCTGCACGGGGATGACGGCAAGCTGAGCTGTATCTCGCGTTTGA CTGTTGCGGTCGTGCCGATTGGCGAAAACAGTCCGCAGCCTATGGAGGCGTCGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCTCTATTTGGCAGGACTGCCTTTGCTTCTGCCGCTTCGGCCGATTGCCGTTAAGGGAAGGGGCGCCAGACAATGGCCGTCGTCTCCATCCAGCGCCT ATAACTCATGACGCAACGCATTTTTTTCGCTCACGCCAACGGTTTTCCATCTGCCACCTATCGCAAGCTGTTTGAAGACCTGACGCCCGAGTACGCAGTC ACCCATCTCGATCAGCACGGTCATGACCCGCGCTTCCCGGTCGATGACAACTGGCAGAATCTGGTGCAGGAGCTGGTTGAACAGCTAGCGGCGTTGCAGG AGCCAGTCTGGGGAGTCGGGCATTCGCTTGGTGGAATGCTGCACTATCACGCCGCCTTGCAACGCCCGGAGCTTTATCGCGGGGTGGTCATGCTCGATTC GCCTATGCCGACCTGGCTGGATCAAACCTTGATCTGGGCGGGTAAACGCTTTGGTTTCATTGATCGTCTGACGCCCGCGGGGCGTACCCTTGGTCGTCGC
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Amino Acid Sequence |
>esterase
MSIWQRPPSLEQLNANRQNTIVELLDIRFEAVEEDCLTASMVVDSRTHQPYGLLHGGASVVLAETVGSMASYQCIDPSRFYCVGLEVNANHIRAVRSGRV TAVCRPVHLGRSSHVWDIRLHGDDGKLSCISRLTVAVVPIGENSPQPMEAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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