Pseudomonas sp. 10B238, RT21_RS18160

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 10B238 scaffold12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGACACCCGTGTCGGCGGTAAGCAACTCAAGCTGCGTCGCTATCGCGAAGATTGATGCTTGGATGTAGCGGCACGCGATGAGGCTGGGCCTCGTCAGAAA TAGAAAGGGTGGACTTCGGTCCACCCTTTTTTTTGCGCTCAACTCGTTGAAGCGAGAACGGTAGGGTGGATCACGCTTCAACGATCCACCAAGCAAGTCG ACGCCACCGCTGCGGCTTACGGTGAATTAAAAAAACGTCACCCACCCTACGGTAATTGCCCGGTTTTCGGCTGGCTTGTGCCACGCGAATGAACCCGTCG CCCCCGGAACGACTTGTACCGCTAGCGGAAGGGTAGGGTGAATCGCGCTTCACCCTACCGCGAGCCAAAAGCTAAACGTCCGAACCCTACACCGTATTCA AAAACCTGACCCAAACGTTCAGGCTGTTCAAACTCTGAACAACATGCTACAAACGAGCGCAACCTAATTGATCTAGCCGCTTGAAAACGAAGGGAAAACC
DNA Sequence for Gene
>RT21_RS18160
ATGACCAAGTCGGAGTTGATCGAACGCATCGTCACCCAACAAGGCCTTCTTTCGTCCAAGGATGTTGAGCTGGCCATCAAGACCATGCTCGAACAGATGG CCCAGGCACTGGCCACCGGCGACCGCATCGAAATCCGCGGCTTCGGCAGTTTTTCCCTCCACTATCGCGCCCCCCGCGTCGGCCGAAATCCCAAAACCGG CCAATCCGTCCCGCTTGACGGCAAGTTCGTCCCGCATTTCAAGCCGGGGAAGGAGTTGCGGGATAGGGTCAATGAAGAAGAATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCTTGTTAAATGGAAGTGTTCATTCGCTAGCTTATATAAAAATGCCGCAGGTCAGCGTCTTAACAATAATTCGCTGTTTGGTTTGGCAATTTTTACTCT CCGTGGCAGTATGCGCCGTTTTTATTTAGCGCGTCCCTTGGAGGGGATTCATGCAGGAAACAGGAAGCTACGCCGCCCACACCCGAGATGACGAAATCGA CCTAGTGGAGTTGGTCAAAGCGCTATGGTCTCAGAAACTCATCATTGTCTGCGCCACGATTGCAGGCGCAGCGATAGCCTTGGCATACGCGCTGTTTTCA ACGCCTGTTTACGAGGCAAAGGCTACCGTCCTTCCCCCGTTGCTCTCTGACATCGCTTCCTACAACGCCGGCAGAACGGAGTCTTCAGAGAATCAATCCC AGCTCAAGCCGTTCACAGTCGATGAGGTTTATGCGGTATTCACTCGTAATTTAAGATCTCTTTCTCTTCGGCGAGACTTTTTCAAGGACGTTTACATTCC
Amino Acid Sequence
>integration host factor subunit beta
MTKSELIERIVTQQGLLSSKDVELAIKTMLEQMAQALATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVPLDGKFVPHFKPGKELRDRVNEEE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site