Pseudomonas sp. 10B238, RT21_RS14535
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 10B238 scaffold9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACTTCCAGCAGGTCGGCGGCATCGAGTGCTATCCCGTTACCGGCGAAATCACCTACGGTCTCGAGCGACTCGCGATGTATCTGCAGGGCGTCGACTCAG TCTACGACCTGATCTGGACGGACGGCCCGTTCGGCACCGTCACCTATGGCGATGTGTTCCATCAGAACGAGGTGGAGCAGTCCACCTATAACTTCGAACA CGCCAACGTCGACAAGCTGTTCGAACTCTTCGACTTCTATGAATCGGAAGCTAACCGGTTGATCGAACTGGAGCTGCCGTTACCCACCTATGAAATGGTG CTGAAGGCCTCGCATACCTTCAACCTGCTGGATGCTCGCCGGGCCATCTCGGTGACTGCGCGGCAGCAGTACATCCTGCGCGTGCGGGCACTGGCTCGCT CGGTGGCGCAGAGCTATTTGCAGGCACGCGCCAAACTCGGCTTCCCCATGGCCACCCCGGACCTGCGTGACGAAGTACTGGCCAAGCTGGAGGCTGCAGA
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| DNA Sequence for Gene |
>RT21_RS14535
ATGAGTGCACTGGATTTCCTGGTCGAGCTCGGCACCGAAGAGCTGCCGCCCAAGGCCTTGGGCAAGTTGTCCGACGCGTTTCGCACGGGCATCGAGAAAG GCTTGAAGGACGCTGGTCTCAAGCATGGCCGGGTACAGGCGTTTGCCGCACCCCGACGTCTCGCAGTACTGATCGAGCAGCTCGACACCGAGCAGCCTGA TCGCAGCATCAACCTCGACGGGCCGCCGCTGCAGGCGGCGTTCGACGCCGAAGGCGAACCGACTCAGGCCGCCCTGGGCTTTGCGCGCAAGTGCGGCGTG GACCTCGCCGAAGTCGACCGCAGCGGCCCCAAACTCCGATACAGCCGCTCGATACCTGGCCAGGCGACTGCTGAGCTGCTGCCCGCTATCGTCGAGACAT CGCTTAACGAGCTGCCAATTCCGAAGCGCATGCGCTGGGCCGCTCGCAAGGAAGAATTCGTCCGGCCAACCCAGTGGCTGGTCATGCTATTCGGTGATCA GGTCGTTGACTGCACCATCCTGACTCAACGCGCCGGTCGCGAATCGCGTGGCCACCGGTTCCATAGCCCGAGCCCAGTTCGCATTTCCAAGCCGACAAGC TATCTGGAAGATTTGCGCGGCGCTCATGTCATTGCCGATTTTGCCGAACGCCGCGAGCTGATCGCCAAGCGTGTCGAGCAGCTCGCCAGCGAGCAGAACG GCAGTGCTATCGTGCCGCCAGCGCTGTTGGACGAAGTGACCGCGCTGGTCGAATGGCCTGTACCGCTGGTGTGTTCGTTCGAAGAACGCTTCCTTGAAGT ACCACAGGAAGCGTTGATCACGACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGACGCCAACGGCAAGCTGCTTCCGCGCTTCATCACAGTTGCC AACATTGAATCCAAGGATCCGGCTCAGATCGTTGCGGGTAACGAGAAAGTGGTGCGTCCTCGCCTCACCGACGCCGAGTTTTTCTTCAAGCAGGACAAGA AACAGAAGCTCGACAGCTTCAATGAGCGCTTGAAGAACGTAGTCTTCCAGGCTCAGCTTGGGACTGTGTACGACAAGGCGGTGCGCGTCTCCAGGCTGGC CGCATTCATTGCCGAACGCACCGAAGGCAATGCCCAGTGGGCGGCGCGCGCGGGCCTGCTGAGCAAATGCGACCTGGCCACCGAGATGGTCAGCGAATTC CCGGAAATGCAGGGAATTGCGGGTTATTACTACGCCGTCAACGATGGTGAACCCACTGACGTCGCGCTGGCATTGAATGAGCAGTACATGCCCCGCGGTG CGGGTGCAGAGCTGCCGGTGACCCACACAGGTGCCATCCTGGCGGTGGCGGACAAGCTGGATACGCTGGTGGGCATCTTCGGCATTGGCATGCTTCCCAC CGGTAGCAAGGATCCCTACGCGCTTCGCCGCGCGGCCTTGGGCATTCTGCGCATCCTGATCGAAAAGCGTCTGGATCTAGATCTGGTTGCTGCCGTGCGC TTCTCCATTAACCAGTTCGGAGGTCAGGTCAAGACTGAAGGCTTGGCCGATCAGATCCTCGATTTCATTTTTGATCGCCTGCGTGCGCGGTACGAAGACG AGGGCGTCGAGGTGGCGTCCTATCTATCGGTTCGTGCCGTACAGCCGGGTTCAGCTTTGGACTTCGATCAGCGCGTGCAAGCCGTACAGGCGTTCCGCAA TCTGCCGGAAGCCGAAGCCTTGGCGGCTGCGAACAAGCGCGTCTCGAATCTGCTGAGCAAGTTCGAAGCAAAGCTACCGGAAACCGTCGAGCCTCGTTAC TTCGACAATGCCACCGAGTTCTCTTTGTATTCTGCGCTGCAGCAGGCCGAACAAGCCGTGCAGCCCCTGGCTGCGGATCGTCAGTATCGCGAGGCGCTCG AGCGTCTGGCGCACCTGCGCGGTCCGGTGGATGCCTTTTTCGAGGCGGTATTGGTCAACGCCGAAGACGCTTCGGTTCGCGCCAACCGCTATGCCTTGCT TGCCCGGTTGAGAGGATTGTTCCTTGGCGTTGCCGATATTTCCGCACTTGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGGTGAAGCTGATCGTGCTGGATCGCGACGGCGTGATCAACGAGGATTCCGACGCCTACGTGAAGAGCCTGGAAGAATGGATTCCGATCCCGGGCTCG ATCAAGGCGATCGCACGGCTATGCAACGCTGGCTGGACGGTGGCAGTTGCCACCAACCAATCCGGCCTTGCCCGCGGCCTGTTCGACGCCACCACACTCG GCGACATGCATTTCAAAATGCAGCAACTGGTGATGGAAGAGGGCGGTCGCGTCGATCTGATCGTGCATTGCCCGCATGGCCCCGACGAAGGCTGTGATTG CCGCAAGCCACTGCCCGGGTTGTTCGAGCAGATCGCCGAGCACTTTCATCTTGAAAGCCTCACAGGTGTCCCTGTGGTGGGCGACAGCCAGCGCGATCTG CATGCAGGGATGCGCCTCGGCGGCATTCCTTACCTGGTTCGCACCGGAAAGGGCTCGAAGACTGCAAAAGGTCCGCTACCAACCGGCACTCAGGTTTTCG
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| Amino Acid Sequence |
>glycine-tRNA synthetase subunit beta
MSALDFLVELGTEELPPKALGKLSDAFRTGIEKGLKDAGLKHGRVQAFAAPRRLAVLIEQLDTEQPDRSINLDGPPLQAAFDAEGEPTQAALGFARKCGV DLAEVDRSGPKLRYSRSIPGQATAELLPAIVETSLNELPIPKRMRWAARKEEFVRPTQWLVMLFGDQVVDCTILTQRAGRESRGHRFHSPSPVRISKPTS YLEDLRGAHVIADFAERRELIAKRVEQLASEQNGSAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDANGKLLPRFITVA NIESKDPAQIVAGNEKVVRPRLTDAEFFFKQDKKQKLDSFNERLKNVVFQAQLGTVYDKAVRVSRLAAFIAERTEGNAQWAARAGLLSKCDLATEMVSEF PEMQGIAGYYYAVNDGEPTDVALALNEQYMPRGAGAELPVTHTGAILAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKRLDLDLVAAVR FSINQFGGQVKTEGLADQILDFIFDRLRARYEDEGVEVASYLSVRAVQPGSALDFDQRVQAVQAFRNLPEAEALAAANKRVSNLLSKFEAKLPETVEPRY FDNATEFSLYSALQQAEQAVQPLAADRQYREALERLAHLRGPVDAFFEAVLVNAEDASVRANRYALLARLRGLFLGVADISALG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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