Pseudomonas sp. 10B238, RT21_RS11725

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 10B238 scaffold7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGACCCTGCTGGGCGACGTCACCGCCGAGATGGCCGTGGCGCGCGAGGAGACCTTCGGCCCGCTGGCGCCACTGTTCCGCTTCAGCGACGAGGCAGATG TGATCCACCAGGCCAACGACACCGAGTTCGGCCTCGCTGCCTACTTTTATGCACGCGACCTGGGACGGGTGTTTCGTGTCGCCGAAGCGCTGGAGTACGG CATGGTCGGTATCAACACCGGGGTAATCTCCACCGAGGTGGCCCCGTTCGGCGGCATGAAGGCCTCCGGGCTCGGGCGCGAGGGCTCGCGCTACGGTCTG GACGAGTACGTGGAGATCAAATATCTGTGTCTGGGCGGCCTTTGAGCCGGCCAGCAATTGCGTCGTGCAAAATATTGCACATGCTATTACTGTTATCCGA ACGCCCGGATGGCCCGGCAGTCGATCATCGTATGCTGCCGGACCCGCTTCCAGGTGTTCATTCCGACCCGAGCCGACGATGAGCGGCTACTGAGGAGCTT
DNA Sequence for Gene
>RT21_RS11725
ATGAGCAAGACCAACGAATCCCTAATGAAACGCCGTGTCGCCGCCGTTCCCCGTGGGGTCGGCCAGATCCATCCGATCTTTGCCGATCACGCGAAGAACA GCAGCGTGGTCGACGTCGAAGGTCGCGAGTTCATTGATTTCGCCGGCGGCATTGCTGTGCTGAATACTGGCCACCTGCACCCGAAAATCATCAAAGCGGT GGAAGCGCAGCTGCACAAGCTGACCCACACCTGCTTTCAGGTGCTGGCTTACGAGCCCTACGTCGAACTGTGCGAGAAGATCAACGCGCGGGTGCCAGGC GATTTCGCCAAGAAGACGTTGCTGGTCACTACCGGCTCCGAGGCGGTGGAAAACGCCGTGAAGATCGCCCGCGCTGCCACCGGTCGCGCCGGGGTGATCG CGTTCACTGGCGCTTATCACGGTCGCACCATGATGACCCTGGGGCTGACCGGCAAGGTCGCGCCGTACTCCGCTGGAATGGGCCTGATGCCGGGCGGCAT CTTCCGAGCGCAGTATCCCTGCGCTATCCATGGCGTCAGCGTTGATGAGTCGATCGCCAGTATCGAACGCATCTTCAAGAACGACGCCGAGCCGCGCGAT ATCGCCGCGATCATCATTGAACCGGTGCAGGGCGAGGGCGGCTTCAACGTCGCACCCAAAGAGTTCATGGTCCGCCTGCGCGCGCTATGCGACGAGCACG GCATCCTGCTGATCGCCGATGAAGTGCAGACCGGCGCCGGACGAACCGGGACGTTCTTCGCCATGGAGCAGATGGGTGTGGTCGCTGATCTGACCACCTT CGCCAAATCGGTCGGCGGCGGCTTTCCGATTGCCGGCGTCTGCGGCAAGGCTGAGATCATGGACGCCATCGCGCCTGGCGGGCTGGGCGGCACTTACGCC GGCAACCCGTTGTCCTGCGCGGCAGCGCTGGCTGTCATGGAAATCTTCGAGGAAGAGAAGCTGCTCGACCGCTGCAAGGTAGTGGCAGAAAAACTCACCA CCGGGCTCAAGGCGATCCAGGCGCGGCACAAGGAAATCGGTGAGGTTCGTGGGCTCGGCGCGATGATCGCCATCGAGCTGTTCGAGGACGGCGACCATGC GCGTCCGGCCGCGGCGCTGACTTCGCAGATTGTCGCCAAGGCACGGGACAAGGGCCTGATCCTGCTGTCCTGCGGCACCTACTACAACGTGCTACGTGTG CTTGTGCCGCTGACTGCAGAGGACGAGCTGCTCGAACGTGGCCTGGCGATCATCGCCGAGTGCTTCGACGAGCTGACCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCACCCGAGGCGCGTCGGCATCCGCAACGGACGTCAGGCGCGCCGCGACCCCGACCCTCGGTTACAATGCGCGGTATTCCGCCGTGCTACCCGAGGTCG TCATGCAGCCGTTCGCCATCGCTCCCTCCATTCTTTCCGCCAACTTCGCCCGTCTGGGTGAAGAAGTGGACAACGTCCTCGCCGCCGGCGCCGACATCGT CCATTTCGATGTGATGGACAACCACTACGTGCCCAACCTCACCATCGGCCCGATGGTTTGCTCGGCACTGCGCAAGCACGGCGTCACCGCGCCTATTGAC GTGCATTTGATGGTCCGTCCGGTGGACCGCATGATCGGCGACTTCCTCGAAGCTGGTGCCAGCTACATCACCTTTCATCCGGAAGCTTCGGATCACATCG ATCGATCGCTGCAGCTGATAAAGGATGGCGGTGCCAAGGCCGGACTGGTGTTCAATCCGGCCACCCCGCTGGATGTGCTCAAGTACGTGATGGACAAGGT
Amino Acid Sequence
>4-aminobutyrate aminotransferase
MSKTNESLMKRRVAAVPRGVGQIHPIFADHAKNSSVVDVEGREFIDFAGGIAVLNTGHLHPKIIKAVEAQLHKLTHTCFQVLAYEPYVELCEKINARVPG DFAKKTLLVTTGSEAVENAVKIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVAPYSAGMGLMPGGIFRAQYPCAIHGVSVDESIASIERIFKNDAEPRD IAAIIIEPVQGEGGFNVAPKEFMVRLRALCDEHGILLIADEVQTGAGRTGTFFAMEQMGVVADLTTFAKSVGGGFPIAGVCGKAEIMDAIAPGGLGGTYA GNPLSCAAALAVMEIFEEEKLLDRCKVVAEKLTTGLKAIQARHKEIGEVRGLGAMIAIELFEDGDHARPAAALTSQIVAKARDKGLILLSCGTYYNVLRV LVPLTAEDELLERGLAIIAECFDELT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site