Pseudomonas sp. 10B238, RT21_RS09705
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 10B238 scaffold5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCATCAAGCGCCGCCCTGGCTTGCCGAGCTGGACATGGCGGAGATTCCGTACGTCTGGGCGGACGACATCATGGCCAAACTCTGGCGAAAGCTGGCGAT CAATTGCGCCATCAACCCGCTTAGCGTGCTGAACGATTGCCGTAACGGCGAATTGCTGAATCATCCCGAGCCGCTGCACCGGCTCTGCAACGAGCTCAGC GAGGTGCTGCGGGCGTGCGGCCAGCGCGCGGCCGCCGATGGGCTCGAGGCGGAAGTGTTGCGCATCATCGAGGCGACCGCGCAAAACTATTCATCGATGT ATCAGGACGTGCGGAGCGGGCGCCGAACCGAAGTCGGCTTTCTGCTTGGGCAGGCTTGTAGGGCCGCACGTCAGCATGGTCTGGCAACACCCGAGCTGAA CGAACTGTTCGAGCGACTCCAGACGCTCCTGCGCTGTCACGGATTGCCCCCCGACTGAGCCCCCGCTACCCTGCAGAAACACCCTTCGCCCGTGCCTGCC
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| DNA Sequence for Gene |
>RT21_RS09705
ATGACTCTGCGCCAGCGCCTTGAAAATCTTCCGGTCGGCCGCAAGCTGCTGATCGCCTTGCTCGTGCTGCTGGCAGCCTTGCTGCTGGTCTCCAACCTCA CGTTTATCAGCGCGGCCTATTGGATATCGCGGCAGAGCGTGGCGCCCCAGGCCATGCATACGCTCGGGGCGCTATTCGCAACACCTGAGCTGAGTGATCG CGCCCTGCAATCCAAAGCGGCTGCTGACGAGCTGCTGGGGAAGCTGAACGAATATGCGCCGCTGCGGGCGGCTGTGGTCTACGACAGCGCGGGGCGCAGC CTGGCTGAACTGTATCGTGGCGATCGGCTGGACTTACCGCAGCAGGTGAGCGACTTGCCGGAGTGGCAGAAGAGCGAGATGCGCGCCAATCTGTTGATCG AGTTGCCACAGGCCGCGGGGCCATCAGGTCATCTATTGATGGTCGCCAGCAGCGAACTGCCAGGCGCGTTCTACACGGGCACCTTGACCGCCAGCCTCGC CATCCTGCTCGCCAGCCTGCTGCTATGGGCGCTGGTGGCACGGCAGATTCGTCGTCTGATTACCCGGCCGATCCGCGACCTGGAGGCCCTGTCCCGCCAG GTCACCCGAGAAGAAGACTATTCCCTCAGGGCGACACCGAAAAACCGGGACGAGATCGGCCACTTGGCCGATGCCTTCAACACCATGCTGTCGCGCATGG AGGCTCGCGAGCAGCAGCTCAAGCGTGCCCGAGACGATGCCCAGGAAGCCTTCGATCACGCCCAAGGTCTGGCAGAGGAGACCCGTCATTCCAACCGCAA GCTCGAGCTCGAAGTCCAGGTTCGCAGCAAGATCGAAAAGAAACTCACCGGCTTCCAGAACTACCTGAACAGCATCATCGACTCGATGCCCTCGGTGCTC ATTGCGCTCGATGAGCAACTCTACGTGACCCAGTGGAATCAACAGGCCAGTGTGCTATCCGGAACGTCAATCGATGACGCCTTGAACCAACCCGTTTTTA TCGCCTTCGAGCCGCTAAGGCCTTTCCTGACTCAGATCCGTCGTACATCCGAGCATCATCAGGTCGAGAAGATCGAACGTGTCACCTGGGCCTTCAATGG TGAGCCTCGGCATTACGCATTGACGCTCTACCCCCTGATGGGCGGTGGCGGTCGGGGCGTGGTGATCCGCATCGACGACATTACCGAGCGGATCAACATG GAAGAAATCATGGTGCAGTCGGAAAAGATGCTCTCGGTAGGCAGCCTTGCCGCAGGTATGGCGCACGAGATCAACAACCCCCTCGGCGCCATCCTGCACA ACGCACAGAACATCCGCCGGCGGCTATCGCCTGAGCTTGAGCGGAACCGTGACGTCGCTCTGGACACCGGGGTCTCGCTGGAAGCCGTCAACCTGTACCT GCAGCAAAGGGAGATCCCGCAGCTGCTCGACGGTATTCAGCAAGCCGGATCGCGAGCGGCCAAGATCGTCAGCCACATGCTGAGTTTCAGTCGCCTGAGC AACCGGCAACTGGCGGAGTGCCCGCTGACCGTGCTTATTGACCAGGCGTTGGAGATTGCCGGCAACGACTTTGCACTGATGGACGGTTTCGACTTCCGCT CTATTGAAATTCTCCGAGACTTCGATCCCCAGGTGGACCGCGTCCCCTGTATCGCCAACGAGCTCGAACAGGTGCTGCTGAACTTGCTGAAAAACGCCGC CCAGGCTATCCATCAGAGACCGGAGCGAAGCCGCGGGCAGATCATCCTGCGCACACGGCTGAATCCGCCTTGGTGCGAAATCCAGGTCGAAGACAATGGC AGCGGAATTCCTGAACATATCCGCAAGCGAATCTTCGAGCCCTTTTTCACTACCAAGGAGGTGGGCCAGGGAACCGGGCTGGGTCTTTCCGTTTCGTATT TCATCATCACCAACAATCACAAGGGCCAGATGGAAGTGCAGAGCAGGCCGGACCAGGGCACCTGCTTTACGCTGCGCCTGCCGCTGACATCCGCTACTGA ACCCAACAACAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATCAAGGAATCCAGATGGGCAACCGACTCTCGAAGATCTATACCCGTACCGGAGATGCCGGAGAAACCGGCTTGGCCGACGGCCGCCGCGTGCCCAAGGA TCACCCAAGAATCGAGGCGATGGGCGAAATAGACACCCTCAACAGTCAACTGGGCCTGTTGCTGGCCGAGCTGGCCGAAGCCCAGGCGCGCTGGCCGGAT CTGGCCGAACTGATCGAAGTCCTCGGGCCCTGCCAGCATCGCCTGTTCGACCTGGGCGGTGAGTTGGCGATGCCTGAGTATCAGGCACTGACCGACGCCG AGGTCGCCCGTCTTGAGAAGGCGATCGATCATTGGAATCAGGAGCTAGGACCGCTGGAAGATTTCATCATGCCGGGCGGCTCACGACTGATCGCCCTCGC CCATCTGTGTCGGAGCATGGCGCGTACCAGCGAGCGCCGTTGTCAGCAACTTAATGCGATCGAGCCGCTACGCGCGGTCGGCCTGGCTTACCTCAATCGC
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| Amino Acid Sequence |
>histidine kinase
MTLRQRLENLPVGRKLLIALLVLLAALLLVSNLTFISAAYWISRQSVAPQAMHTLGALFATPELSDRALQSKAAADELLGKLNEYAPLRAAVVYDSAGRS LAELYRGDRLDLPQQVSDLPEWQKSEMRANLLIELPQAAGPSGHLLMVASSELPGAFYTGTLTASLAILLASLLLWALVARQIRRLITRPIRDLEALSRQ VTREEDYSLRATPKNRDEIGHLADAFNTMLSRMEAREQQLKRARDDAQEAFDHAQGLAEETRHSNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSVL IALDEQLYVTQWNQQASVLSGTSIDDALNQPVFIAFEPLRPFLTQIRRTSEHHQVEKIERVTWAFNGEPRHYALTLYPLMGGGGRGVVIRIDDITERINM EEIMVQSEKMLSVGSLAAGMAHEINNPLGAILHNAQNIRRRLSPELERNRDVALDTGVSLEAVNLYLQQREIPQLLDGIQQAGSRAAKIVSHMLSFSRLS NRQLAECPLTVLIDQALEIAGNDFALMDGFDFRSIEILRDFDPQVDRVPCIANELEQVLLNLLKNAAQAIHQRPERSRGQIILRTRLNPPWCEIQVEDNG SGIPEHIRKRIFEPFFTTKEVGQGTGLGLSVSYFIITNNHKGQMEVQSRPDQGTCFTLRLPLTSATEPNNS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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