Pseudomonas sp. 10B238, RT21_RS06180

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 10B238 scaffold3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCTATATCGGATACGGTTATAGGAAATGGCGTCAAGCTGGATAACCAGATCATGATCGCGCACAACGTACAGATCGGCGATAACACTGCCATGGCAGGG TGTTCCGGCATTTCCGGGAGCACCAAAATCGGTCGCAACTGTATGATCGCTGGCGGCGCCGGGCTGGTTGGGCATATCGAAGTCTGCGATAACGTGTTCA TAACCGGCATGACCATGGTCACCCGCTCGATCACCGAGCCGGGAAGTTATTCTTCGGGGACGGCCATGCAGACCGCCGCGGAATGGCGCAAAAGTGCTGC CCGGATTCGTCATCTCGACGACATGGCGCGCCGCCTGCAGCAAGTAGAAAAACGCCTGGCCTCCGTGACCCCGCGCGGGGATGCGTCTTCTGATGGCTGA CCCCACCGTCTGATCGCTCTTGTCAGAAGGCATTTGCCAGCGGGTCGCGCAGCCATATGGCTGCGCAGACTCCCAATCTCCTTACGGGCTTTTTCTTCAT
DNA Sequence for Gene
>RT21_RS06180
ATGATGGATATCAACGAGATACGCGAATACCTTCCCCACCGATACCCCTTTCTACTGGTTGACCGGGTGGTGGAGCTCGACACGGACGCCAAGCGTATTC GTGGCTACAAGAACGTCACCATCAACGAACCCTTCTTCAACGGTCACTTCCCGCAACATCCAATCATGCCGGGTGTATTGATCATTGAAGCGATGGCGCA AGCGGCAGGACTGCTTGGTTTCAAGATGATGGGTGCGAAGCCAGCCGATGGCACGCTTTACTTCTTCGTTGGCTCGGACAAGCTGCGCTTCCGTCAACCA GTCGTGCCGGGCGATCAGTTGACCCTCGAGGCATCTTTCATCAGCGCCAAGCGCGGAATCTGGAAGTTCGATTGCCGCGCCAGTGTTGATGGTAAGCCGG TATGCTCGGCCGAAATCATTTGTGCGGAACAGAAGATATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTTGGTCGACCCTCGCGCCATCGTCGACCCTGCGGCCCGGCTGGGGGATAACGTTCAGGTCGGCCCATGGTCGATAATCGGCCCGGATGTCGAAATAGG CGAGGGAACAGTGATCGCGTCTCACGTGGTCATTAAAGGGCCGACCCGTATTGGCCGGCACAATCGAATCTTCCAGTTTTCTTCGGTGGGTGAAGACACG CCCGACCTCAAATACAAGGGCGAGCCCACGCGCCTTGTGATCGGTGACCACAACGTGATCCGGGAGGGGGTAACCATTCACCGCGGCACTGTTCAGGATC GAGGCGAGACCACGCTCGGCAACCACAACCTGATCATGGCCTATGCCCACATCGGTCATGACAGTGTGATCGCCAATCATTGCATCCTGGTCAACAACAC GGCGCTGGCCGGTCATGTGCACGTTGGTGACTGGGCGATTCTGTCCGGATACACGCTGGTGCACCAGTATTGCCACATCGGTGCGTACAGCTTCTCCGGC
Amino Acid Sequence
>3-hydroxyacyl-ACP dehydratase
MMDINEIREYLPHRYPFLLVDRVVELDTDAKRIRGYKNVTINEPFFNGHFPQHPIMPGVLIIEAMAQAAGLLGFKMMGAKPADGTLYFFVGSDKLRFRQP VVPGDQLTLEASFISAKRGIWKFDCRASVDGKPVCSAEIICAEQKI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site