Pseudomonas sp. 10B238, RT21_RS05380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 10B238 scaffold3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGACCATTATGCGATCGACACGGAGCCATTCTGGGGTGCTGATGGCAAAACCATCTATTTCACCTCAGACCGCGCCGGCAAGCCGCAGATCTACAAGCAG CGTCTTGGCACCAATAACGCAGAGCGCGTTACCTTTGTGGGTAACTACAACGCTAACCCTAAGTTGTCGGCCGATGAGAAGACGCTGGTCATGATCCATC GTCAGGAGGGTTACACGAATTTCAAGGTCGCGGCGCAAGACCTGCAGCGTGGCAATCTGCGCATCCTCTCCGAGACAAGTTTAGATGAGTCGCCCACTGT TGCGCCTAATGGCACCATGCTAATCTACGCGACCCGCCAGCAGGGCCGGGGAGTCTTGATGCTCGTATCAATCAATGGTCGAGTTAGGCTCCCGCTTCCT ACTGCTCAAGGCGAAGTCCGTGAGCCATCGTGGTCCCCTTACCTGAACTGATGCGGTATCAACGCTTTATCTAACCAAAACACACCTGGGGTTGTTACAC
DNA Sequence for Gene
>RT21_RS05380
ATGGAAATGCTGAAATTCGGTAAGTTCGCTGCGCTGGCTCTGGCTATGGCCGTAGCTGTTGGTTGTTCGTCCAAGGGCGGCGACGATTCTGGCGAAGGTT CCTCTGCCATTGATCCGAACGCTGGTTATGGTGCCGATAGTGGTGCCGTTGACGGCAGCATGAGCGAAGAAGCTGCTCTGCGCGCTATCACTACTTTCTA TTTCGAATACGACAGCTCGGACCTGAAGCCGGAAGCCATGCGCGCTCTGGACGTTCATGCCAAGGATCTGAAGTCCGCTGGCAACCGCGTGGTTCTGGAA GGCCACACTGACGAGCGTGGTACTCGTGAGTACAACATGGCTCTGGGCGAGCGTCGCTCCAAGGCTGTTCAGCGTTACCTGGTTCTGCAGGGCGTATCGC CTGCACAGCTGGAACTGGTTTCCTACGGTGAGGAGCGTCCGGTTGCCATGGGCAACGACGAGCAGTCCTGGGCTCAGAACCGTCGCGTTGAACTGCGTAA GTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAGCCATGCTCAAGCACCGTTATGCTCTGACGCTTTTTGCACTTGGACTGCCGCTGTTTGCGGCGGCCCAGGTTCCGGTAGTGGACTACGACTCGCAAA ACCAAAGTGGTGCGGCTGGGTCGGGTTATTCAACCGGGGCGGATACTGGCGGTGCCTATGTCGGGGGCGGAGCGTCAGCTCCGTCTTCGGCGCAGGGCAT GCTCTTCGTGCAGTTGCAACAAATGCAGGAAGAGATCGCGCAATTGCGCGGTATGCTCGAAGTGCAGCAGAACGAGATCCAGCGCCTGAAGCAGGAAGGG CTGGAGCGTTATCAAGATTTAGACCGTCGCTTGTCGGCTGCCTCTTCGGGTGGATCGACCAGCCAGAATTCTTCGACCGCTGGCGCAATTGACGCTAGCG GGGCCGCGCAGGCGCCCACAGGCACCTCATCAGCGCAAACGGCGAGCAGCCAGTCAGCTGATCCTGAAAAGGAAAAGCTTTATTACGACGCTGCATTCGA
Amino Acid Sequence
>peptidoglycan-binding protein
MEMLKFGKFAALALAMAVAVGCSSKGGDDSGEGSSAIDPNAGYGADSGAVDGSMSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKSAGNRVVLE GHTDERGTREYNMALGERRSKAVQRYLVLQGVSPAQLELVSYGEERPVAMGNDEQSWAQNRRVELRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site