Pseudomonas sp. 10B238, RT21_RS04465
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 10B238 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTTGATCATCAACGATGATGCCGAGCTTGCCGCCCGCCTGGGCGTCGGCCTGCATCTCGGCCAGGAAGACGGATCGCTCTCAGCGGCCCGCGCCCTGCT CGGCCGCAAGGCCATCATTGGAGCGACCTGTCATGCGCGCCTGGATCTGGCTGAGCAGGCCATCCGTGAGGGCGCCAGCTATATCGCGTTTGGCCGGTTC TTCGACTCCAACACCAAGCCCGGCGCGCCCTCGGCAACGCCTGAACTGCTGGCAGAGGCCCGACAGCGGTTCAGCGTGCCGATCACCGCGATTGGCGGCG TGACGCTGGACAATGCGCCAGGCCTGATCGCCAAGGGCGCCAGTCTGATCGCCGTCGTCCACGCCTTGTTCGCTGCCGATTCGGCGAACGAGGTCGAACG CCGCGCGCGGGCCTTCAGCGAACTCTTCACTATTAATTGAACACGGCACGGCTCCAGCCGCCGTGCTCCTCAAACCTATTCCTGTATCGAGAGAGGCACT
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| DNA Sequence for Gene |
>RT21_RS04465
ATGTCCCGTTCCGAAACCCTCTTCGCAAGTGCTCAGAACCGAATTCCAGGCGGCGTGAACTCACCGGTACGCGCCTTCCGCAGCGTTGGCGGCACGCCGT TATTCTTCAAGCACGCCGAAGGCGCCTATGTCACCGACGAAGATGACAATCGCTACGTAGATTACGTCGGTTCCTGGGGCCCGATGATTCTGGGGCACAG CCATCCTGACGTACTCGACGCGGTCCGCAATCAGCTGCAACACGGATTGTCCTACGGTGCACCGACCGCCATGGAAACCGAAATGGCCGAGCTGGTCTGC AGCCTGGTGCCGTCCATGGAAATGATGCGCATGGTCAGCTCCGGCACCGAGGCGACCATGAGCGCGATCCGCCTGGCACGTGGCTATACCGGACGTGACA GCATCATCAAGTTCGAAGGCTGCTACCACGGCCACTCCGACAGCCTGCTGGTCAAGGCAGGCTCAGGTGCCCTGACCCAAGGCGTTCCCAGTTCTGCGGG GGTACCGGCAGCATTCGCCAAGCACACCCTGACGCTGCCCTTCAACGACCTGGCCGCTGTCGAGCAGATGCTCGCCGAAGTGGGCAGCGAAGTGGCCTGC ATCATCGTCGAGCCGGTCGCAGGCAACATGAACTGCGTACCGCCTGCGCCCGGTTATTTACAGGGGCTGCGCGAGCAGTGCGACAAACACGGCGTGGTGC TTATCTTCGATGAAGTGATGACCGGCTTCCGCGTCGCCCTCGGCGGCGCTCAGGCCCATTACGGCGTTACCCCGGACCTGACCACCTTTGGCAAGATCAT TGGCGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGCGCCATCATGGAGCGCATCGCCCCGCTGGGCCCGGTTTATCAGGCCGGCACCTTGTCAGGT AACCCGTTGGCGATGGCGGCCGGCTTGACGACGCTGAAGCTGATCAAACGCCCCGGTTTTCATGAGGAGCTCACCGCTTACACCACGCGTATGCTGCAGG GCCTGAAAGAGCGGGCTGAAGCCGCCGGCATCCCGTTCGTCACCACCCAGGTGGGCGGCATGTTCGGTCTGTATTTCAGCGAAGCGGATAACATCGTCAC GTTCGACGACGTAATGACCAGCGACGCCGAGCGCTTCAAACGTTTCTTCCATCTGATGCTTGAGGGCGGCGTGTACCTGGCGCCCAGCGCGTTCGAAGCC GGCTTCACCTCCATCGTTCATGGCGACAAGGAGTTGCAGATCACCCTGGATGCCGCCGAGCACGCCTTCGCTCAGCTGAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCTGATCCCCGACCTACTACAAGCCGTGCTGCTGACCCTGACGGGGTTGGCGAGCGCCATCTGGATCGGCAGCGCCCGGCGCGGCTACGGCGAGCCGGA TCAACCGGCTCTGTTCTCGGCACTGCTTGCGTTCACTCTGGCGGCCGGGACAGGTGCATGCGCGGCGGCACGCCTAGCGTTAGGTGCTGATACGCTCGAA GCGGAACGCTGGCTGCTGCAGGCAACCTTGCTGCTTGGCTTGCCGCTCGTCGGCGTAGTCGCGCTGACTCTGTCGCGCAGATGGATCTGGAGCCGCCCCA CCTGGGGCCGTGTAGTGATTGGGTTGTGTGCGTTTTTTGAACTGGCCAGGCAGCTGGGCTGGAGCGCGCCGTATGCGCTTTCGCTGGGTTTGCTGAGCGC TCTGCTGGTGGCTTATGCAGGCTTGCTGCAATGGCCTGCACGCCTGCAGGCCGCGGCGGGGTTGGCTGGCGGCGTTTTACTCATGGCTCTGCTCCCCTGG
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| Amino Acid Sequence |
>glutamate-1-semialdehyde 2,1-aminomutase
MSRSETLFASAQNRIPGGVNSPVRAFRSVGGTPLFFKHAEGAYVTDEDDNRYVDYVGSWGPMILGHSHPDVLDAVRNQLQHGLSYGAPTAMETEMAELVC SLVPSMEMMRMVSSGTEATMSAIRLARGYTGRDSIIKFEGCYHGHSDSLLVKAGSGALTQGVPSSAGVPAAFAKHTLTLPFNDLAAVEQMLAEVGSEVAC IIVEPVAGNMNCVPPAPGYLQGLREQCDKHGVVLIFDEVMTGFRVALGGAQAHYGVTPDLTTFGKIIGGGMPVGCFGGKRAIMERIAPLGPVYQAGTLSG NPLAMAAGLTTLKLIKRPGFHEELTAYTTRMLQGLKERAEAAGIPFVTTQVGGMFGLYFSEADNIVTFDDVMTSDAERFKRFFHLMLEGGVYLAPSAFEA GFTSIVHGDKELQITLDAAEHAFAQLK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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