Pseudomonas sp. 10B238, RT21_RS03420
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 10B238 scaffold2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACTGACATAACGATAAACTACGACTCACCGAGGCGATGGTAGGGCGAAATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAA CGATTCGTCGCACTGCCGAAACGCTACTGAAGAAAGTAGGTTGTGATGTGATCACGGCGGTGGATGGCTTCGATGCGCTTGCCAAGATCGCGGATAGTCA CCCGCGCATCATCTTCGTCGATATCATGATGCCCAGGCTTGATGGTTATCAGACCTGCGCGCTGATCAAGAACAACAGTTCTTTCAAGTCCACGCCGGTG ATCATGCTGTCCTCGAAGGATGGTTTGTTTGACAAGGCCAAGGGGCGGATCGTGGGGTCGGACCAGTACCTCACCAAACCGTTCAGCAAAGAAGAGTTGC TCGGTGCTATCAAGGCCCATGTGCCGGATTTTTCACCGGTTGAGCAAGTATCCTGAAGTCCGGCCCTGTGTGCCGCTGAAGCCTTTCCTACGGAGAAACC
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| DNA Sequence for Gene |
>RT21_RS03420
ATGGCTCGCGTTCTGATTGTTGATGACTCGCCGACCGAGATGTACAAGCTGACAGCCATGCTGGAAAAGCATGGGCACGTCGTGCTCAAGGCCGAAAACG GTGCCGATGGCGTAGCGCTTGCGCGCCAGGAGAAACCGGACGCGGTTTTGATGGATATCGTAATGCCCGGCCTGAACGGTTTTCAGGCAACTCGCCAGCT GACCAAAGATGCTGAAACCAGTCACATTCCGGTGATCATTGTGACCACCAAGGATCAGGAAACCGATAAGGTCTGGGGCAAGCGTCAAGGTGCCAAGGAT TACCTGACCAAGCCTGTGGACGAAGCGACACTGCTGAAGACCCTGAGCGCCGTACTTGCCGGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGACGATTTCGGGATTCGGACAAAGGAAGTTGCCAGCATGTCGGATACGCCTTCGCCTTTTCAGCGACTCTTGGAGATCGACAGCCGTTGTAGGGCTTT GGCTGCCGGATTGCCGTCGCAGCAAGAAGCTGTCCAGACATGGGCAGGTATAGGTTTCCGGATGGGTGGCCGACTGTTTGTTGCCCCGATGGGGGAGGTT GGCGAAATACTCCACGAGCCGCGCTATACCCTGCTCCCCGGAGTGAAAGCCTGGGTGAAAGGGGTTGCCAACGTCCGCGGCAGGCTTTTGCCTATCATGG ATCTGTGCGGCTATCTAGGACTGGAGTTATCGCCGCTACGCAAGCAGCGGCGCGTGCTGGTGGTGGACCATCAGGAAGTGTTTGCGGGATTGACGGTCGA TGAAGTGTTCGGCATGCAGCATTTTCCGGTAGATGCTTTTTCCGAACAGCTGCCTCCTGTTGAGGCATCGATTCAACCATTCATTCATGGTGTTTTTCAG
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| Amino Acid Sequence |
>chemotaxis protein CheY
MARVLIVDDSPTEMYKLTAMLEKHGHVVLKAENGADGVALARQEKPDAVLMDIVMPGLNGFQATRQLTKDAETSHIPVIIVTTKDQETDKVWGKRQGAKD YLTKPVDEATLLKTLSAVLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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