Pseudomonas sp. 10B238, RT21_RS02895

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 10B238 scaffold2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCATTCTCGCCGCCACCAATTTAAATCTCGAGGAAATGGTGCGCGAAGGGCGTTTCCGTGAAGACCTGCTCTACCGTCTGAATGTCATCACCCTAAACC TTCCACCCATGCGCGAGCGCCCGGAAGACGTGCTGACCCTCGCCGAGCGCTTCCTGGCGTTCTTCGTAAAAAGCTATGGCCGACCAGCGCGCGGCTTCAG CGACAACGCGGTTGCCGCACTGAAGGCCTATCGCTGGCCAGGCAACGTCCGTGAGTTGCGCAACGTGGTCGAGCGCGCCAGCATCATCTGCCCGCAAGAC ATGATCGAAGTCAGCCATCTTGGCCTGGCCGATCAGGCCGTCAGCAACGCCCCACGCATCGGTGAGCCGCTCAGTTTGGAAGCGCTGGAAAAAGCCCATA TCTCGGGCGTATTGAGCACCAGCGACACGCTTGAGCAAGCCGCCCGAATTCTAGGCATCGACGCATCGACGCTTTATCGAAAACGTAAGCAATACGGCCT
DNA Sequence for Gene
>RT21_RS02895
ATGAAAATCCAGATGAAGCTGAGAACCCGGCTGTTCCTGGGTTTCTCGGCATTGATGACGGTGGCCTTGCTTGGGCTACTGCTGGCGCTGGTTAGCGTCG TGCAAATGGCAAAGAGCCAGGAAAATCTCATTCGCGATAACTTCGGTGTCATCGAGGCCAACCAGCAGCTGCGCCAGGCCCTGGGAAACCAGCTACTGCT GCTGGTCCGTGAACAGCGCGACGCTGAAGCCCTGAACGAATACCGCGAAATCTTTCTGGGCGCTCTGGCGCGCGGTATGGCGAACGCCAACGACGAGCAG GACCGCAAAGCTTATGAAGCCATCGGCGACGCCTATACGCGCTTTGCCGTGCAGCTGGAAACACCCTCCAACCTGAACGTGACACTGCTCGAGGATAATC CCCTTAGCCAATCCTTCAACCGCGTTCGCGAGTTAATGGTGGACATGCAACAGTCCGCCTACAACCAGATTCGTGACACCGAGATTCGCAGCCGCGAACG GGCACAATTGCTCGCCGGGCTGCTCGGGTTGACCGGTATTGCGGTGCTGCTGATCGGCTTCGTCACCGCGCACAGTTTCGCCCGGCGCTTCGGTGACCCC ATCGAGCAACTGTCCAGCGTGGCTGACCAGATCGGCCGCGGCGACTTCAATATCAATTTGCCCACCTCGCCCATCGCTGAGCTATCGTCGCTGATTCGTC GCTTCGGTCTGATGGCGCAGGCCCTGCACCAGTTCAAGCAAACCAATGTCGAAGCGCTGGTCGATGGCCAGCAAAGGCTGCAGGCATTGCTCGACAGCAT CGATGACGGCCTTTTGATCATCGACCGCCAGGGCCGTCTGGAACATGCCAACCCGGTTGCGCAGCGCCAACTGGCCTGGGAGACAGAGCATCTGGGGTCG ACGCTTGGCCAGGCCCTCGGCTATCCGGAGCTGGACGAGGCCGCTCAGCAAGTGCTGGCCGATACGCCCCTATCCGGGCCGCCGGAAGATCTGGTGATCG AGGCCGACGGCGAGCGCCGCCTGTTGTCATGGCGCATGAGCCCAGTGAACCATCACGACGGCCGCATCAGCGGCGCGGTGATGGTGCTTCACGACGTAAC CGACCAACGAACCTTCGAACGGGTGCGCAACGAGTTCGTGTTGCGTGCCTCGCATGAGCTGCGCACCCCCGTGACAGGCATGCAAATGGCCTTCAGTCTG CTGCGCGAACGAACGCACTATCCGGACAATAGCCGCGAAGCCGACCTGTTCACCACCGTGCATGAAGAGATGCAACGCTTGGTCACGCTGATCAACGATC TACTGAACTTCTCGCGCTACCAGAGCGGTCAGCAAAAACTCGAACGCGTGCCGTGCGACCCGGCCGTGCTCCTCGAGCAAGCACGGCAGCGTTTCCAGGC GAGTGCTGCGCAGAACCATATCGAAATCAAGCTTGAACTACAGACGCCGCTGCCAAGCCTGTTGCTGGACCAGCAGCAGATGGACCGGACGCTCGACAAC CTGCTCAGCAATGCACTGCGGCACACACCTGACGGCGGTGAGATCCGCCTACTGGCGCGGCATCACGGCGAACGGGTCATTCTCAGTGTCGAAGACAATG GCGAAGGCATCCCCTATAGCCAGCAGGCGCGCATCTTCGAGCCGTTCGTGCAGATCGGTCGACGCCGCGGCGGCGCCGGACTGGGCCTTGCCTTATGCAA AGAGATCGCTCAGCTGCATGGTGGTCGTATCGGCGTGCATTCGCGCATCGGCCACGGCACCATCTTCTATATCGCCCTGCCCATCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGGCACGGCGGGAAGAATAAAAAGGAGCCACCATGCCCAGCCTCAACCCCAGCCAAGAGCAGCTGAAGCGCTTCGCCGAGCATATGCCGGCCAACGA GCCGATCCTCATGCTCAACTTGCTGCGCTTTAACGATCAAGCCGCCTACCCTGCCGAAAGCGGTCACCCGCCTTGTTCCGGCAGAGAAGCCTATGCAGTC TACAGCCGCACCGCCATCAAGAAGGTGCGCTCAGCCGGTGGCGACGTGGAGATCATGGCCAACGCCCGTGTCGCGCTGATTGCGCCGGAGCAGGAGCATT GGGACGAGGTGCTGCTGGTGCGCTATCCCTCGCCTGAAGCCTTTCTGGCAATGCTGGCGGACCCGGAATACCGCGCCGCCACGATCCACCGTACCGCAGC ACTCGCCGACTCGCGGCTGATCGGCTGTAACCCTCGCAGCTGAGCCGAAGCCTCAGCCTGCTGCGTTCAGCACCGCGAGCAGCGCTGCGGTTTCAGCGTC
Amino Acid Sequence
>histidine kinase
MKIQMKLRTRLFLGFSALMTVALLGLLLALVSVVQMAKSQENLIRDNFGVIEANQQLRQALGNQLLLLVREQRDAEALNEYREIFLGALARGMANANDEQ DRKAYEAIGDAYTRFAVQLETPSNLNVTLLEDNPLSQSFNRVRELMVDMQQSAYNQIRDTEIRSRERAQLLAGLLGLTGIAVLLIGFVTAHSFARRFGDP IEQLSSVADQIGRGDFNINLPTSPIAELSSLIRRFGLMAQALHQFKQTNVEALVDGQQRLQALLDSIDDGLLIIDRQGRLEHANPVAQRQLAWETEHLGS TLGQALGYPELDEAAQQVLADTPLSGPPEDLVIEADGERRLLSWRMSPVNHHDGRISGAVMVLHDVTDQRTFERVRNEFVLRASHELRTPVTGMQMAFSL LRERTHYPDNSREADLFTTVHEEMQRLVTLINDLLNFSRYQSGQQKLERVPCDPAVLLEQARQRFQASAAQNHIEIKLELQTPLPSLLLDQQQMDRTLDN LLSNALRHTPDGGEIRLLARHHGERVILSVEDNGEGIPYSQQARIFEPFVQIGRRRGGAGLGLALCKEIAQLHGGRIGVHSRIGHGTIFYIALPI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site