Pseudomonas sp. 10B238, RT21_RS02835

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. 10B238 scaffold2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCGCCAACGCCATGCAAAACGTTACGTACAGCCCGGGTTGGCATTGATTGGCGACGCTGCTCACACCATTCATCCGTTGGCCGGGCAGGGCGTCAACC TTGGGTTGCTCGACGCAGCGGTGCTTGCAGAAGTGATCCAGGGCGCGGTATCGCGTGGTGTTCGGCTGGGTGACCCGCGGGTGTTGGGGCGTTTCGAGCG GCGTCGGATGCCCCATAACTTGGCCATGATGGCGGCAATGGAGGGGTTCGAGCGCTTGTTCCAAGCCGACCCACTGCCGCTGCGTTGGTTGCGTAATGCC GGGTTGAAAGGTGTTCAGGCTCTGCCCGCAGCCAAAGCGCTGTTCGTTCGCCAAGCGCTGGGCTTGAGCGGCGATATGCCGGAGCTGGCTAGGCTCTGAT CGACTAGGGGTCTGCCGCTGGATGCGCGAATTGTCGCGTTGAGAAAGTAAATGACATTCACTACTATTCAGCCTCTTGAACAAATCTAAGAGGCTGATCC
DNA Sequence for Gene
>RT21_RS02835
ATGCAGGCAAGCAAAGGTTTACTCGCCGTTCTCGCGCTCACCGCGCTGTCGAGTGCTGTACAGGCTGCCGAAGAAGTAGTGGTCTACTCTTCGCGGATCG ATGAGCTGATCAAGCCGGTTTTCGATGCCTACACGGCCAAGACCGGCGTCAACGTCAAGTTCATCACGGACAAAGAAGCGCCGCTGATGGCCCGCATCAA GGCCGAAGGCGAAAACACGCCGGCGGATCTGCTCCTGACGGTAGATGGTGGCAACCTCTGGCAGGCCGAGCAGATGGGCATCCTGCAGCCGATGAACTCG GCGGTAGTTAACGACAACATCCCTTCGCAGTACCGCTCCTCTACTGATGGCTGGACGGGTTTGTCGCTGCGGGCGCGGACCATCGTTTATTCACCCGAGC GTGTGGAAGAGGGTGAGCTGACGACCTACGAAGCCCTCGCCGACAAGAACTGGGAAGGCCGTCTGTGCCTGCGGACCAGCAAAAAAGTTTACAACCAGTC CCTGACCGCTACCCTGATCGAAACCCATGGCGCCGAGAAGACCGAAGAAATCATCAAGGGTTGGGTCAATAATCTTGCTACAGACGTGTTTGCCGACGAC ACCGCGTTGGTTCAGGCAATCGATGCCGGTCAGTGTGATGTAGGTATCGTCAACACTTACTACTACGGCCGCCTGCACGCGCAAAACCCGGATCTGAAAG CCAAGCTTTTCTGGCCGAATCAGGATGGTCGCGGTGTACACGTCAACCTGTCGGGCATCGGCCTGACCAAGCATGCGCCGCACCCCGAGGCTGCACGCAA GCTGGTCGAGTGGATGACCACCCCCGAAGCGCAAAGCATCTTTGCCGATATCAACATGGAGTTTCCGGCGAACCCCGAGGTAAAGTCTTCGGCTGAGGTC TCTGCTTGGGGTGATTTCAAGGCGGACACTATCCCGGTCGAAGTTGCCGGCAAGCGCCAGGCTGAAGCGATCATGCTGATGGACCGCGCTGGTTGGCGAT AA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAGCTTTTGGCTGGCCGCCTAGGCGGCCAGCCAGGCTCCGTTCATATCTGAATGCCTGGTTTTGCAGTTTGCAGCTACGGCTATAATCGACGCCCCCGC ATGCCGGGGGCGTCGTCTTTTCTGCTTTTGAGGCTTGCGTGTCCCACCCCGTCGAGCGCCGCTGGTATCCCATCACTTTCGCAGTTGCCGCGCTGGTATT GCTGCCGCTGAGCGTCCTGCTGTTCAGTTGGAGCGATATCGACACCAGCATCTGGTCACATCTCTGGCAGACCCAGCTGCCGCGTTTGCTGGGCAATACG TTAACGCTGGTTCTAGGTGTTTCGGTGGGTGTGACCGTGCTTGGGGTCAGCCTGGCCTGGTTGACTTCGTTGTGTGAGTTCCCGGGGCGGCGCTGGCTGG ATTGGGCGCTGATGCTGCCTTTTGCCATTCCCGCCTATGTGCTGGCGTTCGTGTTCATCGGGCTACTCGATTTTGCCGGGCCGGTGCAAACACTGGCTCG
Amino Acid Sequence
>iron ABC transporter substrate-binding protein
MQASKGLLAVLALTALSSAVQAAEEVVVYSSRIDELIKPVFDAYTAKTGVNVKFITDKEAPLMARIKAEGENTPADLLLTVDGGNLWQAEQMGILQPMNS AVVNDNIPSQYRSSTDGWTGLSLRARTIVYSPERVEEGELTTYEALADKNWEGRLCLRTSKKVYNQSLTATLIETHGAEKTEEIIKGWVNNLATDVFADD TALVQAIDAGQCDVGIVNTYYYGRLHAQNPDLKAKLFWPNQDGRGVHVNLSGIGLTKHAPHPEAARKLVEWMTTPEAQSIFADINMEFPANPEVKSSAEV SAWGDFKADTIPVEVAGKRQAEAIMLMDRAGWR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site