Pseudomonas sp. 10B238, RT21_RS00670 (tpx)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. 10B238 scaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGTCTTATCGGCATGATGGGTACCTTTATCGACACCATCATCATCTGCTCGATCACCGGCCTGGCGATCATCTGTTCCGGTGTCTGGACCGGTGGCGAA AGCGGTGCGGCGCTGTCTGCAGCAGCCTTCGAGTCGGCAATGCCCGGTGTTGGTGCGGCGCTGTTAACCATTGCACTGGTGGTGTTCGCGTTCACCACGA TCCTGGGCTGGAGCTATTTCGGCGAGAAGTGCTGGGAGTTCTTGGTCGGTACCAAGGCGATCTGGCCGTTCCGGGTCATTTGGGTCCTCGCTGTTCCGTT CGGTGCGATCGCTCAGCTCGATTTCGCCTGGCTGTTGGCGGACACCCTGAATGGGCTGATGGCGATTCCTAACCTCGTCGCGCTGCTGCTGCTGAGCCCG GTGGTGGTCAAATTGACCAAGGAATACTTTGCCCGTACACACGCCGCTTAAAAACCCGCGCCGCGGGTACGCCCGCGGCCCATGACTGAGAGGAGTTCGC
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| DNA Sequence for Gene |
>RT21_RS00670
|tpx
ATGACTGAAGTAACCCTGAAAGGCAACCCGATCCAGGTTGCCGGCAACTTTCCGCAGGCTGGCCAGAAGGCGGCGCCGTTCAGCCTGGTAGGCGGAGATC TGTCGGACGTGACGCTTGCGAGCTTCGCGGCTAAGCGAAAGATCTTGAACATCTTCCCAAGCATCGATACGCCGACCTGTGCCACCTCGGTGCGCAAGTT CAATGCACAGGCCAACGAACTGGCTAATACAGTGGTGCTGTGTATTTCTGCCGATTTGCCTTTCGCGCAGAAGCGCTTCTGCGGCTCTGAAGGCCTGGAT AATGTCATCAACCTATCCACCATGCGCGGGCGCGAGTTCCTAGAGAACTACGGTGTACTGATCGCGAGCGGCCCGCTTGCCGGTGTGTCGGCTCGTGCTG TCGTCGTGCTGGATGAACAGGATCAGGTGCTTCACAGCGAGCTGGTTGCCGAGATCGGTTCCGAGCCGGACTACGACGCTGCGATTGCGGCGCTTAAATA A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCTGCCAATAGGAAGCGGTGCAACGCCGCTTCCTTTGCTTCTGAAATCTGACGACAAAAATACACCCGAGCCGCGCCTCTTCTCTGCCATTAATCAAT TGGCTGAATAGCCCTGCTGACGCTTAGCTTCAGTACGTGGTTTTCCAAACGCAGCCGTGCCAGGCAACGGCGACAGGCGCTGATTTGCAGCACCGTAAAA TCTTTTTCTGTCGCTGCGGTCAGAGCATTCGTTGCCTATTGAATGGATTCGCTTATGTCTAGCTCGCACATCAAGAAGAAGATCGGTGTATCCGGCACAG GGATGATCGCGCACTGCTTCATCCGGCTGATCAAGCAGCACTATCACGATCTGGAAATCTCGCGAGTTCTGACTCGCCGTCCATTGAATTCCTTCACTGA TTTTCCGCTGTCTGAACGCCTTACCAATTCGATTGATCATCTGATCGCTGATTCTGACCTTATCGTCGAGTGCAGCGGTGATGTCTTTCATGGCACCGAG
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| Amino Acid Sequence |
>peroxidase
MTEVTLKGNPIQVAGNFPQAGQKAAPFSLVGGDLSDVTLASFAAKRKILNIFPSIDTPTCATSVRKFNAQANELANTVVLCISADLPFAQKRFCGSEGLD NVINLSTMRGREFLENYGVLIASGPLAGVSARAVVVLDEQDQVLHSELVAEIGSEPDYDAAIAALK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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