Pseudomonas simiae MEB105, RU03_RS05365
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas simiae strain MEB105 contig_7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCTGGTCAGCCCGTTGTGGCGTTTTGTGCTGGCGCCCGGGGTGTGCGGGCCGGACGCGGCGGCAGGCGTGGTGATGCCGAGCATCGATCGGGTCGGACG CTACTTCCCGCTGGCGGTGGTGGCGTTGCTCGATCACGACACCAATCCTGCCTCCCTGGTAGGTGGCCCGGACAGCTGGTTCGAGCAGACCGAAGCGCTG TTGCTCAGCACCCTGGATGCCGGGGCTACCTTCGAAAGCTTCAATGAAGGCCTCGATGCCCTGGGCCTCCCGTCGACTGAGTCGCGCGCGGTAGACAGCC GTTTCGCCGGCCTGCAACGGGTGGCCGCCACCGAACCGCACCAGCGTATGACCGCCCTCGCCGAACAGGCCTGCGACGGCGCGAGCCTGTGGTGGGGCCG TGGGTCACAACGTATTTCCCCTGGTTTGTTGCGGTGTCAGGGCCTGCCTGCCGCTGGCGATTTTGCGCAGTTTTTGCTCGGACAAGAAGGTGTGGTGTAG
|
|
| DNA Sequence for Gene |
>RU03_RS05365
ATGGGGTCGACGTACAAATCCGCGAGCAAAAGCCATGTGGGCATGGTCCGCCAGGTCAACGAAGACGCCTGCCTGGACCTGCCGGAAAACCGCCTGTGGG TGGTGGCCGACGGCATGGGCGGGCATGCGGCGGGGGACTATGTGAGCAGCCTGATCGTCGACAGCCTGCGCAGCGTGCCGGTAGGGCGTTCCCTGGATGA ATACACCGCAGCGCTGCGTAATGACCTGCTGCGCATCAATGCCGCCGTGCGCGAAGAAACCGCCCACCGTGGCGTAACCATGATGGGCAGCACCGTGGTG CTGTTGGCCGCGCGTGGCTTGCGCGGCGTGTGCTTGTGGGCTGGCGACAGTCGCTTGTACCGCCTGCGCGATGGCGTGCTCGAAGGGATCTCCCGCGACC ACAGTTACGTGCAAGACCTGCAAGACAGCGGTCTGCTCAGCGAAGCTGATGCGCGCACGCATCCACGCGCCAACATCGTCACCCGAGCGATTGGCGTGGA GGCGTACCTGGAATTGGCGGTGGTCGACCTGCTGATCGCCCCCGGTGACAGCTACCTGTTGTGCAGCGACGGCCTGAACAAGACCGTTGAAGACCATGAA ATCCGCGAAGTCCTGGGCCACGACACGCCGGATGAAATCGTGCGCAGCCTGGTGCATCTGGGGCTCAGCCGGGGTGCGCCGGACAACATCACTGCCATCG TCGTGAAGGTATCACCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACATCGTCATCCCGGGTTATGACATCGAAGGCGAAATTGGCGAAGGCGCCATGGCCAGCGTGTACCTGGCGACCCAGCGTTCCCTGGAGCGCAAAGTGGC CTTGAAGGTGATGGCGGCGGCATTGGCGGCCGACCCGAGCTTCTGCGAGCGCTTCCTGCGCGAGGGCAAGACCCTGGCGCGCTTGTCGCATCCGCACACG GTGACCATCCATGACATCGGCAATGTCGGTGAGCTGTACTACATGGCCATGGAATACCTGCCCAACGGCACGCTCAAAGAGCGCATCGCCGCCGGCATGA CGCCGGAGCAGGGGGTGACGCTGATCCGCCAGATCGCCTCGGCACTGGGCTATGCCCATGCTCAGGGCCTGGTACACCGCGATGTGAAACCGGCCAACAT TCTGTTCCGCGCGGATGGCACGGCAGTGTTGTCCGACTTTGGTATCGCCAAGTCGCTGGATGATCGCACCCAGTTCACCCAGGCCGGTTTTGCCGTGGGC
|
|
| Amino Acid Sequence |
>phosphatase
MGSTYKSASKSHVGMVRQVNEDACLDLPENRLWVVADGMGGHAAGDYVSSLIVDSLRSVPVGRSLDEYTAALRNDLLRINAAVREETAHRGVTMMGSTVV LLAARGLRGVCLWAGDSRLYRLRDGVLEGISRDHSYVQDLQDSGLLSEADARTHPRANIVTRAIGVEAYLELAVVDLLIAPGDSYLLCSDGLNKTVEDHE IREVLGHDTPDEIVRSLVHLGLSRGAPDNITAIVVKVSP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|