Pseudomonas simiae MEB105, RU03_RS05225

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain MEB105 contig_7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGACGGTGGCGTCGGTGGCCAGTACCAGGGTGGTCAGCAGGTCATCGGCGATGCCCTGGGCCAGGCGTGCGATCAGGTCGGCGGTGGCCGGCGCGATCA GCACCAGGTCGGCCCATTTGGCCAGCTCGATATGGCCCATGGCGGCTTCAGCTGCCGGGTCGAGCAGGTCCAGGTGAACCGGGTGGCCGGACAGCGCTTG CATGGTCAGTGGGGTAATGAACTCACTGCCACCGCGGGTCATGACTACGCGCACTTCGGCGCCTTGGTCCAGGAGCCTGCGAACCAGTTCTGCGCTCTTG TAGGCGGCAATGCCGCCGCCAACGCCGAGAACGATGCGTTTCCGATACAGACGCTGCATTGGTTTGCCTTTCCAGTTCAGTGATGCCAGTTCAGTGACGC CTGCGATGCCCCCTCCCCAGGGGAAATCACATGCAAAAAAGAGGGCCTAAGATAACACAGCGTCCGCGAGGCAACAGCGGCGCACGCGCAGGGAGGTGGG
DNA Sequence for Gene
>RU03_RS05225
ATGAGTATTCGTGATTGGCCGGTGGCAGAACGGCCCCGGGAAAAGCTTTTGGAGTGGGGCGCGGCGAGTCTGTCGGATGCCGAACTGTTGGCGATCTTCC TGCGTACCGGGGTTTCCGGCAGGAGTGCGGTGGACCTGGCGCGCCATCTGTTGGCGCAATTCGGTGGCCTGCGCCCACTGCTGGAGGCCAGCCAGACGTT GTTCAACCAGCAACTGGGCCTGGGGCCGGCGAAGTTTGCCCAGTTGCAGGCAGTGCTTGAAATGGCCAAGCGGCACATGGCCGAGCGCCTGCGAAGCGAA TCGGTGCTGGAAAGCCCCGTGGCCGTACGGGACTACCTGAAGGCCATGCTGCGCCATGAGCCTCATGAGATCTTCGGCTGCCTGTTCCTTGATTCAAGGC ACAGGGTGCTGGGCTTCGAGGCGTTGTCCCAAGGCACCATCGACGCGGCGATGGTGTATCCCCGGCAGGTGGTCAAGCGCGCTTTGGCCTACAACGCGGC GGCGTTGATCCTGTGCCATAACCATCCTTCCGGCAGCCTTGAGCCGAGCGCAGCTGATCGAAAATTGACCAAGTTGCTGCAGAAAGCCCTGGAAGTGGTG GATGTGCGGGTGCTGGATCACATCATCGTGGGGGATGGCGATCCGTTGTCGATGGCGGAATATGGGTGGATTTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGCCCCATCGGGACGGGCCTGGTGCTCAGGGCTTGACGCTGACGTTCGAGAAATCCTGGCGACCGAACGGACTCACCTGGTAGCCCTCAACATTCTTG CGAGCCAGGGCAAACGCCGTCGGGTGCGCGAGCGGCAACCACAGCGCCTGTTGCTGGATCTGCGCCTGGGCCTGCTGGTACAGCTTACTGCGTACGCCTT GCTCGCTGGTGGTCTTGCCGGCGCTGATCAGTTTGTCCAGCGCAGGGTCGCAGTAGCGCGCGAAGTTAGTGCCGGATTTTACCGCTGCGCAGGAAAACTG CGGGGTCAGGAAGTTATCCGGGTCGCCGTTGTCGCCGGCCCAGCCCATGAACAGCAGGTCGTGTTCGCCGGCCTTGGCGCGACGAATCAGCTCGCCCCAT TCGATCACGCGGATCTCGGCCTGGATGCCGACCTTGGCCAGGTCAGCCTGCAGCAGCTGTGCGCCAAGGTTTGGGTTGGGGTTCAGCAGGCTACCGGTAG
Amino Acid Sequence
>hypothetical protein
MSIRDWPVAERPREKLLEWGAASLSDAELLAIFLRTGVSGRSAVDLARHLLAQFGGLRPLLEASQTLFNQQLGLGPAKFAQLQAVLEMAKRHMAERLRSE SVLESPVAVRDYLKAMLRHEPHEIFGCLFLDSRHRVLGFEALSQGTIDAAMVYPRQVVKRALAYNAAALILCHNHPSGSLEPSAADRKLTKLLQKALEVV DVRVLDHIIVGDGDPLSMAEYGWI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site