Pseudomonas simiae MEB105, RU03_RS04840

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain MEB105 contig_7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGGTAAACCCCGGCGACTCCTCGGCCGCCTGCACGAACACACCCTTGCCAGGCTGAACACTGACCACACCCAGGGCACTCAAGGACGACAACGCCTCGC GCAACGACGCTCGGCTCACCCCCAGTTGCACCGCCAGATCCCGTTGCGACGGCAAGGCATCGCCCGGCCCGAAGCCCTGGTCCTTGATCAGTTTGCGAAT GGCCTGCAGGGCCGCTTCCGGTACGGCTTGGGCGATGGAATTCATAGAAAACTCGAGGTTCCAGTCAACTGAGCGGCTAGTTGTAAAGCTATTCGCCGTC GGCGGCAAGCCACGCCCCAAAGGGGCTCGCGAGTTTTTGCCGACGCTCGAAAAGGGTGCGAAAAATCCGCGAACTGTTCAGACCAGTCCGACCATCGCAA CGCAATAAATCCCTGGCTTGCAGGCTTTATTGAGAGTGATGGCATGGGCTGTGCACTGAGCAAATCCAGAAAATTCCTTCGCCCTTCTCGGAGAGTTGCC
DNA Sequence for Gene
>RU03_RS04840
ATGACCAAGCGCTACAGCGCCCTGCTTACTGCCCTGTTTGCCAGCCTGATGCTGAGCCAGGCACCCGCCCAGGCCAACGGTCTGGACGACATCGTCGCCC GTGGCACCCTCAAGGTCGCCGTGCCCCAGGACTTCCCGCCCTTCGGCTCGGTCGGCCCTGACATGAAGCCCCGCGGCCTGGACATCGACACCGCCAAGCT GCTGGCTGACCAACTCAAGGTCAAGCTGGAACTCACCCCGGTCAACAGCACCAACCGTATTCCCTTCCTCACCACGGGCAAGGTCGACCTGGTGATCTCC AGCCTGGGCAAGAACGCCGAGCGGGAAAAGGTCATCGACTTCTCCAAGGCTTACGCACCGTTCTACCTGGCCGTGTTCGGCCCGCCTGAAGCGGCCATCA GCAGCACCGACGACCTCAAGGGCAAGACCATCAGCGTGACCCGTGGCGCCATTGAAGACATCGAGCTGACCGCCGTGGCACCCAAGGAGGCCACCATCAA GCGCTTCGAAGACAACAACTCCACCATCGCCGCCTACCTCGCCGGCCAAGTCGACCTGATCGCCAGCGGCAACGTAGTGATGGTGGCTATCAGCGAGCGC AGCCCGAAACGCGTGCCCGCGCTGAAAGTGAAACTCAAGGACTCGCCGGTGTACGTGGGCGTGAACAAGAACGAGCCGGCGCTGCTGGAGAAGGTCAACC AGATCCTGGTCGCGGCCAAAGCCGACGGCAGCCTGGAAAAGAACGCTATGCAATGGCTGAAAGAGCCACTGCCCGCCGATCTCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCGACGGAGCTGACTCATGGCGTATCAATTTGACTTCGTGCCAGTGCTGGCCAATACCGATCTGCTGTTGCGTGGCGCGCTGTTTACCCTTGAGCTGAC GGCCATCGGCGCCATCCTCGGTGTAGCCCTGGGCACCGTCGGCGCCGTGGTGCGGGCGTGGAAGATCCAGCCGTTTGCGTGGTGCTTCGGCGTGTATGTC GAGTTGATCCGCAACACGCCGTTCCTGGTGCAGTTGTTCTTCATCTTCTTCGGCCTGCCGTCCCTGGGGCTGAAGATCACCGAGTGGCAAGCCGCCGTGC TGGCAATGTTGATCAACCTGGGCGCCTATTCCACGGAAATCATCCGCGCCGGTATTCAGGCTATTCCGCGCGGACAACTTGAAGCCGCCGCCGCACTGGC CATGACACGCTTCGAAGCTTTCCGCCACGTCGTGCTGCTGCCGGCGCTGGGCAAAGTGTGGCCGGCCCTGAGCAGCCAAATCATCATCGTGATGCTCGGC
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MTKRYSALLTALFASLMLSQAPAQANGLDDIVARGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAKLLADQLKVKLELTPVNSTNRIPFLTTGKVDLVIS SLGKNAEREKVIDFSKAYAPFYLAVFGPPEAAISSTDDLKGKTISVTRGAIEDIELTAVAPKEATIKRFEDNNSTIAAYLAGQVDLIASGNVVMVAISER SPKRVPALKVKLKDSPVYVGVNKNEPALLEKVNQILVAAKADGSLEKNAMQWLKEPLPADL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site