Pseudomonas simiae MEB105, RU03_RS04725

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain MEB105 contig_7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCCACGTCATCCACCCATTGGCAGGGCAGGGCGTGAACCTGGGCTTTCTAGACGCCGCGACACTGGCCGAAGTGCTGCTGTCGGCGACCGAGCGCGGGG AGCGCCTGGCAGATGTAAAGGTGCTGAGCCGCTACGAACGCCGACGCATGCCGCACAATCTGGCGCTGATGGCGGCGATGGAAGGTTTCGAGCGGTTGTT CCAGGCTGACCAACTACCGCTGCGCTGGTTGCGTAATGCCGGGTTGAAGCTGGTCGACCAGATGCCCGAAGCCAAGGCCGTGTTTGTACGCCAGGCGCTG GGCCTGACCGGCGATCTCCCTGACCTGGCCAAACCCTGACAATGAAGCCCGGTCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCATCAGCTTCACCGC AAAATGCTGGCTATGCAACATCTGGTAACGCCTCCACCAAGCGCTACCAAATGTGAGTCCTTATCATTTGCCCTCTTTTTGCAAATGAGAGACTGCCCCC
DNA Sequence for Gene
>RU03_RS04725
ATGTTGGCACCCAAGCGCCTCCTGACTGCTCTGGCACTCACCTTGATCGGCAGCACCACCGTGCAGGCCGCCGACGAAGTGGTGGTCTACTCCTCGCGCA TCGATGAACTGATCAAGCCGGTGTTCGATGCCTACACCCGGAAAACCGGCGTGCAGGTGAAGTTCATCACCGACAAGGAAGCCCCGCTGATGCAGCGCAT CAAGGCCGAGGGCGAAAACGCCACCGCCGACCTGCTGCTTACCGTCGACGCCGGCAACCTCTGGCAGGCCGAGCAGATGGGCATTCTGCAACCGTTCATT TCCCCGGTGATCGACAAGAACATCCCCCTGCAATATCGCTCTTCAAAACATACCTGGACCGGCTTGAGCCTGCGCGCGCGGACCATCGCCTATTCCACCG ACCGGGTAAAACCGGGCGACCTTACCACCTACGAAGCCTTGGCCGACAAGCAGTGGGAGGGCCGCCTGTGCCTGCGCACGGCGAAAAAGGTCTACAACCA GTCGCTGACCGCCACCTTGATCGAAACCCACGGTGCGGCCAAGACCGAAGAAATCGTCAAGGGCTGGGTGAACAACCTGTCCACCGACGTGTTCTCCGAT GACATCGCCGTGCTGGAAGCGATCAACGCCGGGCAGTGCGACGTAGGCATCGTCAACACCTACTACTACGGCCGCCTGCACAAGCAGAAGCCGGACCTGG CGGTAAAACTGTTCTGGCCGAACCAGGGCGACCGTGGCGTGCATGTGAACCTGTCGGGCATCGGTCTGACCCAGCACGCGCCGCACCCGGAAGCCGCCAA GGCGCTGGTGGAGTGGATGACCACGCCTGAGGCGCAGAAGATCTTTTCCGACGTGAACCAGGAGTTCCCGGCCAACCCGGCCGTGGCGCCGTCGGCGGAA GTGGCGAGCTGGGGCAAGTTCGTGGCGGACACCTTGCCGGTGGAAGTGGCGGGCAAGCGCCAGGCCGAGGCGATCCGGTTGATGGATCGAGCTGGCTGGA ACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTCGGCCTCAACTGCACCGCCGATCAAATGTGGGAGCTGGCTTGCCTGCGATAGCATCACCTGGGTATCACTGATACACCGAGGTGCCTGCATCGCAGG CAAGCCAGCTCCCACATGGGTTAGCGGTGACTTCAAAATCTTCATTTGCCTGAGAGCTTTTCCTTGGCCCACCCCGCCCAACGCCGCTGGTACCTGCCGG TCTTCACCGTTGCCGCCCTGGTGCTGCTGCCGCTGAGCGTACTGCTGCTGTCCTGGCAAAGTATCGACGCACAAATCTGGTCGCACCTCTGGGAAACCCA GATGCCGCGCCTGCTGGGCAACACACTGACCCTGGTGTCGGGAGTCGGTGTCGGCGTAACCGTGCTGGGTGTCAGCCTGGCGTGGCTGACCAGCCTCTGC GAATTCCCCGGCCGGCGCTGGCTTGACTGGGCGTTGATGCTGCCCTTCGCCATCCCTGCGTATGTTCTGGCGTTCGTGTTTGTGGGGCTGCTGGACTTCT
Amino Acid Sequence
>iron ABC transporter substrate-binding protein
MLAPKRLLTALALTLIGSTTVQAADEVVVYSSRIDELIKPVFDAYTRKTGVQVKFITDKEAPLMQRIKAEGENATADLLLTVDAGNLWQAEQMGILQPFI SPVIDKNIPLQYRSSKHTWTGLSLRARTIAYSTDRVKPGDLTTYEALADKQWEGRLCLRTAKKVYNQSLTATLIETHGAAKTEEIVKGWVNNLSTDVFSD DIAVLEAINAGQCDVGIVNTYYYGRLHKQKPDLAVKLFWPNQGDRGVHVNLSGIGLTQHAPHPEAAKALVEWMTTPEAQKIFSDVNQEFPANPAVAPSAE VASWGKFVADTLPVEVAGKRQAEAIRLMDRAGWN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site