Strain | Pseudomonas simiae strain MEB105 contig_44, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGACGATCACCGCCGATGGCTTCCTGCGCACGGGGGACAAAGGCGAGCAGGACACCGAGGGCCGCCTGCGCCTGACCGGACGGCTGAAGGAGATCTTCAA GACCAGCAAGGGCAAATACGTGGCCCCGGCGCCGATCGAAAACCGCCTGGCCGAACATGCGCGTATCGAGCAGGTGTGTGTGGTGGGGGATGGGTTGAGC GCGCCTATTGGTTTGTGCGTATTGTCGGCGGTGGAACAGGACCCGCAAGCGCTGCGCAGCAGTCTTGAACGTTGGTTGGTACAGGTCAACCAGACGCTGG ACAAGCATGAGCGCCTGCGCCAACTGGTGGTGGTGAAAGACAGTTGGGCAGTGGAAAACGGCTTTTTGACGCCGACCTTGAAGATCAAACGCAACGCGAT CGAATCGACTTACGGTGAATATTTCCAGCGGTGGAGCGAGCGTTCCGAAACGGTTCTGTGGCAGGATTAGGGCCGTAATAAAACCAATAAGGACAATTCC
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DNA Sequence for Gene |
>RU03_RS27995
ATGAGCCTGTGGCGCACCCAACCGAATATCGAACAACTCAACGCGATCCAGAAAAACACCATCGGTGAACTGCTCGATATCCGCTTTGAAAGCTTCGACG ACGATTCCCTGACCGCCAGCATGGTAGTCGACCATCGCACCCATCAGCCCTACGGCCTGTTGCACGGCGGCGCGTCGGTGGTGTTGGCCGAGAGCGTCGG CTCTATGGCGGCCTATCTGTGTATCGACCCGAGCAAGTTTTATTGCGTCGGCCTGGAGGTCAACGCCAACCACCTGCGCGGTGTGCGTAGCGGGCGGGTG ACGGCGGTGGCCAAGGCGATCCATATCGGTCGCACCACCCAGGTCTGGGACATCCGCCTGACAAGCGATGAGGGCAAGGCCAGTTGCGTGTCGCGCCTGA CCATGGCGGTGGTGCCGCTGGGCGAGAACCCGCCGGCGCGATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGTGGCGTGAGTGTCATCATTCCTGGCAGTTACAGTCATTGCTGTGCCGGCTGGGCATGGTGACAATCAATCTCTGTTTTTGTAGATGGATCCGGTATG TCGCAGCACGTGTTTTTTGCTCACGCCAATGGCTTCCCCTCGGCTACCTACGGCAAGTTGTTCGCCGCCCTGGCCCCGGAATATACGGTGGCCCACCTGC CGCAGCACGGTCACGACCCCCGATTTCCGGTGGACGATAACTGGCAGAACCTGGTGGACGAGCTGATCCATCACCTGGAACAGCAACCTGAGCCGGTGTG GGGCGTGGGCCATTCCCTCGGTGGCGTGTTGCACCTGCACGCGGCCATGCGGTGCCCACAGTTGTATCGCGGGGTGGTGATGCTGGATTCGCCCGTGCTG ACCCGCGCGGACCGCTGGGTGATTCGTGCGGCCAAGCGCTTGGGTTTCATCGACCGCTTGACCCCGGCCGGACGCACCCTGGGCCGTCGCGAGGAATTTA
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Amino Acid Sequence |
>esterase
MSLWRTQPNIEQLNAIQKNTIGELLDIRFESFDDDSLTASMVVDHRTHQPYGLLHGGASVVLAESVGSMAAYLCIDPSKFYCVGLEVNANHLRGVRSGRV TAVAKAIHIGRTTQVWDIRLTSDEGKASCVSRLTMAVVPLGENPPAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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