Strain | Pseudomonas simiae strain MEB105 contig_42, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGTTCGTCGTCGTTGAGGGCAACCGCTATCGCCTGCGGGGGATAGAAGGGCGCAGCCTGCCGATGTCGCGCTCGTTACTGGAACAACTGACCAGGGCGC AGATCATTCGCCAAGGTTTTTTCACCGAGGATCAGGGGGAGTTGGCCGTACGGTTCACGCTGGCGCCCTATAGCCTGGACCAGGCCGTCAGCCGGGCGAC GCTACGGGTGGGTGATCAGCAGTTGGAGTACCGCCACGGCCCGATCGTGCCGGTGGCGTTCCATTGGCCAAACGAGGCGGAGAAAGGTCGCAGCAGCCTG GTGCTGGAGCGTGGTGCCGAGCGGCCATTGGGCATTGAGAAAGACAGTGGCGCCTGGTCGTTGTTCCGGTTTTTCGACCTGATGCAAAGCGAGCCCGCGA GCGGCAGGGATGCGCAGGTTCTCAAGGCTGACCTGGCCGGTCTGCGGGCCAATTACCTGCTCACCAGTCAACGTGACTCGAGCCCATTTCAGATGGCGAC
|
|
DNA Sequence for Gene |
>RU03_RS25685
ATGGCGCACCTTCCGCCTGCCGGAGCAACTGTGAGCGGTGCACAGCCCTGGCGGAGTGCCGGGCGCACGGCGCAAGGCAAGAGCCGCACACTCAACGAGG ATGCGTTCCTCGATTGCCCGCAAAGTGGTTGTTGGGCGGTGGCGGATGGTATGGGGGGGCATCATGCCGGGAATGTAGCCAGCCAACGGGTGGTTCGCAG CCTTGCTGCACTGCCCGGCCAAGGCGATTTTGACCAACGCATCGAGGCCGTTGGGCGGTGCCTGCGAGGCCTCGACAGCCAGTTACAACCTGCCGATGGC GTGGCGGGCATCATGGGCAGTACGGTGGTGGTTTTGTTACTGGAGCACCATCGCGCCGCCTGTGTCTGGGCAGGGGATAGCCGATGCTACCTGTGGCGAG GGCAGCGGCTGTATCAACTGTCGCGGGACCACTCTCTGCAGCAGCAACTGATAGACACGCAACAGCTGAGCCCGGAACTGGCCCAGGCTCATCCTGGCGC AAGAGCCTTGACCCGTGCGGTGGGGGCCAGGCAACCATTGAGCCTTGAGATACTGGAGCTGCGCGCCCAGCCCGGTGATGTGTTTTTATTGTGCAGCGAC GGTCTGTACCAGGGGCTCAGCCACAAGGGGTTGGGGAGTGCCATGAGCGCAGGCACGCCACGGCAAGTGGTGGATCGGTTGTTCCGTGGCGTGCTGCAGG GGCCGGCGCGGGATGACCTGACCGCTGTGGTAGTCCAGCCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGCAGCGGCAGGTCTGCCGAACTTGCTGGCGGGGCGCTATCAGCTTGAGCGGATCCTCGGCACCGGGGGCATGGGGGTGGTCTATCGCGCGCGGGATCT GCTGCATGAAGCTTTCGGCGAGCCAGACTGCCGTGTGGCGCTGAAATTGTTAGGCGAGAGCCTATCCGCCTCCACCGACGCGCATGTGCTTCTCTACAGC GAGTTCGCCCTGACCCGAAGCCTGCACCATGATCACGTGGTGCGTGCATTTTCGTTCGAGGTAGACACAGCCCTCCAAGTGGCATTCTTCACCATGGAAG TGATGCCTGGACTGACCCTGGATCGCCTGCTCCAGGAGTGTCCTCAGGGACTGCCATGGCAAGAGTTGCAACCCATGGCCCTGCAACTGCTGGAAGCACT GGCCTACACCCACCGGCAGGGTGTCCTGCATGGCGATGTGAAACCGGCGAATATCATGGTTGGGGAGCAGGGGCTACGCTTGTTCGATTTTGGCTTGGGT
|
|
Amino Acid Sequence |
>protein phosphatase
MAHLPPAGATVSGAQPWRSAGRTAQGKSRTLNEDAFLDCPQSGCWAVADGMGGHHAGNVASQRVVRSLAALPGQGDFDQRIEAVGRCLRGLDSQLQPADG VAGIMGSTVVVLLLEHHRAACVWAGDSRCYLWRGQRLYQLSRDHSLQQQLIDTQQLSPELAQAHPGARALTRAVGARQPLSLEILELRAQPGDVFLLCSD GLYQGLSHKGLGSAMSAGTPRQVVDRLFRGVLQGPARDDLTAVVVQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|