Pseudomonas simiae MEB105, RU03_RS23525

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain MEB105 contig_42, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGTGTTCAGGCGAGGTGCGGTACGGATTGACCGCCGCCCAGCCGTCTTCGTTGACCGGCACGCCGGCGTCCTTGATCGAGGTCAGGCCCTGGGTTTCCA CCGCTTGCGGGACCACGTCACCATGGGCCCAGGCGGAGCCCGCGGCGATCACACCGACCAACAGCCCGGCGACGAGCAAGGCATTGTGTTTTGTTGTCAT TATTTTTGCCCTCAGGATTGCACGCAAAACCTCATTGCAGAGGCTATGGCAACCATCTTAGAAACCCCGGGACATGGGCCGTATGCTGCTTTGGTGGCCG CCCTCTCCTCCCTTGGTAGTAGGGCTTGTGGGGCACGCCTAAAACAGCGGCGCCCCGGGAAGTCTTCCCGGCCACAGCGGGACTTTTTCCGTATCCGCCC GGCGCCCCGGCGTTCCACCCTGTGCAGGCCAAAACCTCCACTGGGAACTGCAACCATGACAATAAGATCGCTACCCGCCCGCTCACCTTTAAGCCTTGCC
DNA Sequence for Gene
>RU03_RS23525
GTGCAAGCCTTTGTGCTGGTGGGCAGCCTGTCCCTCAGTGCTGTAACGTTCGCGGCCGCCGAACCCGCCAAGCCGACGCGCACTGTCACCTGGGAAGACA TCGCCAACGACCACCTGACCACCCAGGACGTGCTGCAATACGGCATGGGCACCAACGCCCAGCGCTGGAGCCCGCTGGCCCAGGTCAACGACAAGAACGT GTTCAAGCTCACCCCGGCCTGGTCCTACTCGTTCGGCGACGAGAAGCAACGCGGCCAGGAGTCCCAGGCCATCGTCAGCGACGGCGTGGTCTACGTCACC GGCTCCTACTCCCGCGTGTTCGCCCTCGACGCCAAGACTGGCAAGCGCCTGTGGACCTACAACCACCGCCTGCCCGACAACATTCGCCCGTGCTGTGACG TGGTCAACCGGGGTGCGGCGATCTTCGGCGACAAGATCTACTTCGGCACCCTCGACGCGCGCCTGATCGCCCTCGACAAGAACACCGGCAAAGTGGTGTG GAACAAGAAGTTCGGCGACCACGCCGCCGGCTACACCCTGACCGGCGCTCCGGTGCTGATCAAAGACAAGGTCAGCGGCAAGGTGCTGCTGATCCACGGC AGCTCCGGCGATGAATTCGGCGTGGTCGGCCAGCTGTTTGCCCGCGACCCGGACACTGGCGAAGAAGTATGGATGCGCCCGTTCGTGGAGGGCCATATGG GCCGTCTGAACGGCAAGGACAGCACGCCGACCGGCGACGTCAAGGCCCCTTCGTGGCCGGATGACCCGACCACCGAAACCGGCAAGGTCGAGGCCTGGAG CCACGGCGGCGGCGCCCCTTGGCAGAGCGCAAGCTTCGATGCCGAGACCAATACGATCATCGTCGGCGCCGGCAACCCCGGCCCGTGGAACACCTGGGCG CGCACCGCCAAGGACGGCAACCCCCACGACTTCGACAGCCTCTACACCTCGGGCCAGGTCGGCGTCGACCCCAGCACCGGCGAAGTGAAGTGGTTCTACC AGCAAACCCCGAACGACGCCTGGGACTTCTCCGGCAACAACGAGCTGGTGCTGTTCGACTACAAGGACAAGGACGGCAAAGTGGTCAAGGCCACCGGCCA CGCCGACCGCAATGGTTTTTTCTATGTGGTGGACCGCAATAACGGCAAGCTGCAGAACGCCTTCCCCTTCGTCGACAACATCACCTGGGCCAGCCATATC GACCTGAAGACCGGGCGTCCGGTGGAGAACGAAGGCCAGCGTCCGGCCAAGCCATTGCCGGGTGAAACCAAAGGCAAACCGGTGGAAGTCTCGCCGCCGT TCCTGGGTGGCAAGAACTGGAACCCCATGGCCTACAGCCAGGACACCGGGCTGTTCTACATCCCCGGCAACCAGTGGAAAGAGGAATACTGGACCGAAGA GGTCAACTACAAGAAGGGCTCGGCGTACCTGGGCATGGGCTTTCGCATCAAGCGCATGTATGACGACCACGTCGGCACCCTGCGTGCGATGAACCCAACC ACCGGGAAGGTGGTGTGGGAGCACAAGGAAGCCTTGCCGCTGTGGGCCGGCGTGCTGGCCACCAAGGGCAACCTGGTGTTTACCGGCACCGGCGATGGCT TCTTCAAGGCTTTCGACGCCAAAACCGGCAAGGAGCTGTGGAAGTTTCAGACCGGCAGCGGCATCGTCTCGCCGCCGATCACCTGGGAGCAGGATGGCGA ACAATATGTCGGCGTAACCGTCGGCTATGGCGGCGCGGTGCCGTTGTGGGGAGGCGACATGGCCGAGCTGACCAAGCCGGTGGCACAGGGCGGGTCGTTC TGGGTGTTCAAGATCCCGAGCTGGGATAACAAGACCGCCCAGAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTTGCGAGATGACCGAACCGCCTTTTGTGATGAGCGGGCTTGCCCCGCTCACCACAGGATCCCTAGAGGTTGCACGATGAACTACCTGCCCTTGTTAC TCCTGCTCTCCCTGCCCCTGGCGCACGCCGACGATGGCGACGACGCCCCGCTGATCATCAACGGCTGCACCCTCGCCGAACGCAGCCAATGCCCCGGCGC CAACCTCAAGGGCGCCGATTTGCGCAACCAGGACTTGAGCAAGATGAACCTGGCCGGCGCCGACCTGCGCGAGGCGGATCTGCGCCATGCCAACCTCGAC CTGGCCAACCTGGAAAAAGCCCAGCTGCAAGGCGCCAACCTGACCCGCGCCAGCCTGCAACAGGCCAACCTGCGCCTGGCCAACTTCAGCGGCGCCACGC TGATGGCGATCCAGGGCTGGGGCTTGTTTGCCCAGGGGGCGCAGTTCGAAAACGCCAACCTCAGTGCGGCCTACCTGCAGTTTGCGCGGCTGTCCGGGGC
Amino Acid Sequence
>quinonprotein alcohol dehydrogenase
MQAFVLVGSLSLSAVTFAAAEPAKPTRTVTWEDIANDHLTTQDVLQYGMGTNAQRWSPLAQVNDKNVFKLTPAWSYSFGDEKQRGQESQAIVSDGVVYVT GSYSRVFALDAKTGKRLWTYNHRLPDNIRPCCDVVNRGAAIFGDKIYFGTLDARLIALDKNTGKVVWNKKFGDHAAGYTLTGAPVLIKDKVSGKVLLIHG SSGDEFGVVGQLFARDPDTGEEVWMRPFVEGHMGRLNGKDSTPTGDVKAPSWPDDPTTETGKVEAWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA RTAKDGNPHDFDSLYTSGQVGVDPSTGEVKWFYQQTPNDAWDFSGNNELVLFDYKDKDGKVVKATGHADRNGFFYVVDRNNGKLQNAFPFVDNITWASHI DLKTGRPVENEGQRPAKPLPGETKGKPVEVSPPFLGGKNWNPMAYSQDTGLFYIPGNQWKEEYWTEEVNYKKGSAYLGMGFRIKRMYDDHVGTLRAMNPT TGKVVWEHKEALPLWAGVLATKGNLVFTGTGDGFFKAFDAKTGKELWKFQTGSGIVSPPITWEQDGEQYVGVTVGYGGAVPLWGGDMAELTKPVAQGGSF WVFKIPSWDNKTAQK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site